Gene Phep_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3078 
Symbol 
ID8254195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3677456 
End bp3677959 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content43% 
IMG OID644936731 
ProductPhosphoglycerate mutase 
Protein accessionYP_003093337 
Protein GI255532965 
COG category[T] Signal transduction mechanisms 
COG ID[COG2062] Phosphohistidine phosphatase SixA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00800804 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGAAAA AACTACTATT GGTCAGACAC GGTAAATCAG AATGGGGGAA TGCACATCTT 
GCAGACTTTG ACAGACCACT AAACCCCAGG GGGCACAGAA ATGCACCGGA AATGGCCGCA
AGATTACTCC AAAAAGACCT GGTTCCGCAC CTCATCGTAA GCAGTCCGGC TTTAAGGGCC
ATTACCACTG CCAAACATTT TGCACAAGCC TGGAAAAAAT CAGCAGAACA AATAAAAGAA
GAGGCTTCAA TTTATGAAGC AAATGTCAAA ACGCTCTTGA AAGTAATCAA TAGGTTTAAT
AACAGGTATG ACTATATTGC TATTTTCGGG CATAATCCAG GATTTACAGA CCTCGCCAAT
TACCTCAGTG ATACCGATAT TTACAACATC CCTACCTGCG GTACTGTATT GATAGAATTC
CCTTTCGACG AATGGGAACT GGTAAGCCAC CATACCGGCA GGCTGCTCCA GTTCGATTAT
CCTAAAAGTC TTAACGAAGA TTAA
 
Protein sequence
MAKKLLLVRH GKSEWGNAHL ADFDRPLNPR GHRNAPEMAA RLLQKDLVPH LIVSSPALRA 
ITTAKHFAQA WKKSAEQIKE EASIYEANVK TLLKVINRFN NRYDYIAIFG HNPGFTDLAN
YLSDTDIYNI PTCGTVLIEF PFDEWELVSH HTGRLLQFDY PKSLNED