Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3066 |
Symbol | |
ID | 8254183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3665471 |
End bp | 3666115 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644936719 |
Product | Ankyrin |
Protein accession | YP_003093325 |
Protein GI | 255532953 |
COG category | [R] General function prediction only |
COG ID | [COG0666] FOG: Ankyrin repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.590896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00125449 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATC TTGAGACATT AATCGAAACA GGCAACAAAC CGGGGATCTT TGATCTGTTA ACCCAAAACC CGGCCCTGGC CAGCAAAGAT ACCAGTCATG GCATCTCCCC TATTTTACTG GCCTGTTATT ATAAAAAGCC GGAAATAGCT GCGCTGATAG CTAACTTCTC TACAAACATT AACATTTTTG AAGCCAGTGC ACTGGGAAAA ACACAGGAGG CCAGCTTGTT GACAGAAAAA GATCCCGACC TGGTAAACTC TTTTTCTAAG GATGGCTTTA CGGCATTGGG TCTGGCTGCT TATTTTGGCA ATGAAGAAAT AGCCAGACTT TTAATAGCTA AAGGTGCCGA TGTCAATATA CCTGCAAACA ATGGCTATAA TGTTTTCCCC ATCCATTCGG CTGTTGCTGC AAAAAATCAG AACCTTACAA AAATGCTGAT CAATGCCGGT GCCCATGTAA ATGTAACACA GCAGGCCGGT TTTACACCAT TACATGCTGC TGCACAACTA GGTCATGTTG AACTCATTAT AATATTACTG GAACATGGGG CAGAGGTAGA CATACGCATG GAAGGTGGTA AACTGCCTGC AGATTTGGCC CGGGAAAAAG GTTTTGTGGA AATAGCTGAG ATCCTCAGTA TTTAA
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Protein sequence | MADLETLIET GNKPGIFDLL TQNPALASKD TSHGISPILL ACYYKKPEIA ALIANFSTNI NIFEASALGK TQEASLLTEK DPDLVNSFSK DGFTALGLAA YFGNEEIARL LIAKGADVNI PANNGYNVFP IHSAVAAKNQ NLTKMLINAG AHVNVTQQAG FTPLHAAAQL GHVELIIILL EHGAEVDIRM EGGKLPADLA REKGFVEIAE ILSI
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