Gene Phep_3066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3066 
Symbol 
ID8254183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3665471 
End bp3666115 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID644936719 
ProductAnkyrin 
Protein accessionYP_003093325 
Protein GI255532953 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.590896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00125449 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGATC TTGAGACATT AATCGAAACA GGCAACAAAC CGGGGATCTT TGATCTGTTA 
ACCCAAAACC CGGCCCTGGC CAGCAAAGAT ACCAGTCATG GCATCTCCCC TATTTTACTG
GCCTGTTATT ATAAAAAGCC GGAAATAGCT GCGCTGATAG CTAACTTCTC TACAAACATT
AACATTTTTG AAGCCAGTGC ACTGGGAAAA ACACAGGAGG CCAGCTTGTT GACAGAAAAA
GATCCCGACC TGGTAAACTC TTTTTCTAAG GATGGCTTTA CGGCATTGGG TCTGGCTGCT
TATTTTGGCA ATGAAGAAAT AGCCAGACTT TTAATAGCTA AAGGTGCCGA TGTCAATATA
CCTGCAAACA ATGGCTATAA TGTTTTCCCC ATCCATTCGG CTGTTGCTGC AAAAAATCAG
AACCTTACAA AAATGCTGAT CAATGCCGGT GCCCATGTAA ATGTAACACA GCAGGCCGGT
TTTACACCAT TACATGCTGC TGCACAACTA GGTCATGTTG AACTCATTAT AATATTACTG
GAACATGGGG CAGAGGTAGA CATACGCATG GAAGGTGGTA AACTGCCTGC AGATTTGGCC
CGGGAAAAAG GTTTTGTGGA AATAGCTGAG ATCCTCAGTA TTTAA
 
Protein sequence
MADLETLIET GNKPGIFDLL TQNPALASKD TSHGISPILL ACYYKKPEIA ALIANFSTNI 
NIFEASALGK TQEASLLTEK DPDLVNSFSK DGFTALGLAA YFGNEEIARL LIAKGADVNI
PANNGYNVFP IHSAVAAKNQ NLTKMLINAG AHVNVTQQAG FTPLHAAAQL GHVELIIILL
EHGAEVDIRM EGGKLPADLA REKGFVEIAE ILSI