| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3062 |
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| Symbol | |
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| ID | 8254178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3659167 |
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| End bp | 3661011 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936714 |
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| Product | beta-lactamase |
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| Protein accession | YP_003093321 |
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| Protein GI | 255532949 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.367625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.002383 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACTT TCTTCACCCT ATTGATCTGC GTACTGAGCT GTATAAGCTC AAGCAGCCAG
CCCAGACTCA GGCCCAATTC CATAGCCCAA CTAACAGATT CCATTCGGAA CATTGTTCGT
AAACGGAACA TCCCCGGTCT TATGCTGGGT ATCGTTACCA AAGATAGTGT ACTGTTCTCA
GGTGGTTTTG GCTATGCAGA CCTGAAAAAC AAGAGGGCTG TAAACAGCAA AACCTTGTTT
CGTATGGGTT CCATTACCAA GTCGTTCGTA GCCATAGCGA TACTAAAGTT AGTAGAGCAA
GGCAAGCTAA ATCTAACCGA CCGGCTAAGA TATCTTGCCC CAGAGGTCCC ATTTACAAAC
AACTGGGAAA ACACATACCC CGTAAGGTTG GTGAATCTAC TCGAACATAC CACAGGCTTT
GATGATTTCA AATTCAATAA AATGTATACC CTTGAACGCC GGCAGTATAG CTCTGAAGAA
ATGATGTTAG AACAAAAGGC ATCAATGGTC TGCCGCTGGA GACCTTCAGA GCGCTATACT
TACAGCAATG TAAATTATGC TATCCTTGGC TATATCATTA GCAAGTTCAG TGGGACGGAA
TACGATCAAT ACCTAAAAGA AAGCATTCTA CTCCCTCTAG GTATGACTGT ATCCAATTTT
AACACCTGGA GCAGGATGCC CTTTCTCGAC ACTAGGGAAT ATTCAAGTGC TTCAGGTCAG
CTCAAAGAAG TGCCCTCAGT AACGTTATTG CCCGGTGCCG CAGCCTCCTT ATGGTCTTCG
GCAGATGAAA TGAATATATT CCTGCAATCC CTGATCAACC TTGACAGTCG CTTACTATCA
AAAAAAAACT TTGAACTTAT GGAAAGTCCA ACCAGTTCTA TAGGAGCGAC TGCCGGGTTA
ATGACGGGAT ATGCGTTGGG AAATGAAGAT TTTGGGACAA ACAGGGGGCA TGATGGCACC
ATAGGCACCT GCAAATCCAG CTACAGATAC AATAGGAAGT TGGGATATGG TTTCGTACTT
TCATCGAATG CCAACGGTCT GGGAAGTATC GAAACCCTAA TCAACCAGTA CCTAATTGAC
AAATATTCCA ACACTAAAAA ATCAGAACCA TTAACTAGCA TCCCCTTAAA TAAAAAAGAG
CTTAGACCAT ACCTAGGTTA TTACCAAAAA GAGGATCCTA GGTATAATTT ACTGGCTTTT
GCAGATCGAC TGTTGCTGCT TAAGGTTGAG ATCAAGAACG ATACCTTACA ATACAATATT
TTAGGGCGAA CGCACCAACT GATACAAACT GCTCCTTTGG TTTTCCGAGA AAGATGGGGG
ACACAGGCCG AGATCGCTTT TGCCATTAAT GCCGAAGGTA AAAAAGTCAT GATCGTCAAT
AAACATTACA CCGAAAAAGT ACCTCTATCA AAAGCATTCA GCTGGCTTAT TATGATCATC
CTGGCTCTGG TTTTTGGGTT ATACGCTGTT TTTTCTGGGA TAATTGCTAT AGGTTATATC
CTCATTAAAA GGCAAAAGCC GAAGTCACTA CATTTTTTCA TTCTACCCAT GCTCAGCTTG
GTTTTATTAA GTTGGGGCAT TTATGCATTT ATGCATATCT ATAACAACAG TTACCTACTT
TTTAAGCTTG GTGTACCCTC TGCAACATCA ATTTCAATTT TTATGGGGTT AACCTTGTTT
GGCATCTCTA CCTTAATAAA TGCCTTGGTA CTTATTAAAA AATTAAAAAC TATAACGAGC
CGGTATAAAC AAAGTATTCT TATCCTGACT GCCTTATCTT TACTGCTGAT AGCTGGCATT
TTGCTAGCAA ATGGTTGGAT AGGGCTTAGA TTCTGGAAGT TATAA
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| Protein sequence | MKTFFTLLIC VLSCISSSSQ PRLRPNSIAQ LTDSIRNIVR KRNIPGLMLG IVTKDSVLFS
GGFGYADLKN KRAVNSKTLF RMGSITKSFV AIAILKLVEQ GKLNLTDRLR YLAPEVPFTN
NWENTYPVRL VNLLEHTTGF DDFKFNKMYT LERRQYSSEE MMLEQKASMV CRWRPSERYT
YSNVNYAILG YIISKFSGTE YDQYLKESIL LPLGMTVSNF NTWSRMPFLD TREYSSASGQ
LKEVPSVTLL PGAAASLWSS ADEMNIFLQS LINLDSRLLS KKNFELMESP TSSIGATAGL
MTGYALGNED FGTNRGHDGT IGTCKSSYRY NRKLGYGFVL SSNANGLGSI ETLINQYLID
KYSNTKKSEP LTSIPLNKKE LRPYLGYYQK EDPRYNLLAF ADRLLLLKVE IKNDTLQYNI
LGRTHQLIQT APLVFRERWG TQAEIAFAIN AEGKKVMIVN KHYTEKVPLS KAFSWLIMII
LALVFGLYAV FSGIIAIGYI LIKRQKPKSL HFFILPMLSL VLLSWGIYAF MHIYNNSYLL
FKLGVPSATS ISIFMGLTLF GISTLINALV LIKKLKTITS RYKQSILILT ALSLLLIAGI
LLANGWIGLR FWKL
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