| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3058 |
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| Symbol | |
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| ID | 8254174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3653967 |
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| End bp | 3656189 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936711 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_003093318 |
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| Protein GI | 255532946 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00108991 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAACAAGA ATGTAGAAAC AATTTCGATG CCGGTGCTTG GAATGACCTG TGCAGCCTGT
GCCGTTAGTA TTGAATCTAT GATAGCCGCC CAGGAAGGGG TAGACAAAGC TGCTGTTAAT
TACGCTACAC AAACGGTACA GGTGAGCTAT CATCCTGATG TGATACAGCC GGATGCTATG
CAAAAAGCAG TTCAGTCTAT TGGTTACGAT TTAATTGTAG CGCAGGAAGG TGCTGCAGCA
TTACAGGAAG AGGCACAAAA GAACAATTAC ACCACACTTA AAAAAAGAAT GGTCTGGTCG
CTTATCCTTA CCATTCCTGT GGTGATCATC GGTATGTTCT TTATGGATAT GCCTAATGGT
AATTATTATA TGCTGGCCTT AACCACACCG GTGCTGTTCA TTTTTGGCAG AAATTTCTTT
ATTAATGCCT GGAAACAGGC AAAATACGGA AAAGCGAATA TGGATACCCT GGTGGCCCTA
AGTACCGGTA TTGCCTATCT TTTCAGCGTT TTTAACACTT TCTATCCCGA ATTCTGGCAC
AGCAGGGGCT TACACCCACA TGTATATTTT GAGGCTGCGG CAGTGGTAAT TGTATTCATC
ATGCTGGGAA AACTGCTGGA AGAAAAGGCA AAATCAAATA CCTCTTCGGC GATTAAAAAG
CTGATAGGCC TGCAGCCTAA AACAGTTATT GTAATTACAA AAGACGGGGA AAAGGAAATT
GCTGTTGCCG ATGTACATGT TACTGATCAG ATACTGGTAC GTGCGGGAGA AAAGATCCCT
GTAGACGGCG AGGTATATGA AGGAGGCTCT TATGTTGATG AAAGCATGAT TACCGGTGAA
CCTGTTGCAG TAGCTAAAAA AGTGGGCGAT AAGGTGTTTT CCGGAACCAT TAATCAGAAA
GGTAGTTTTA AATTTAAGGC AGAAAAAGTA GGTGGTGAAA CCATGCTGGC CCAGATCATA
AAACTGGTAC AGGATGCACA GGGTTCTAAA GCACCCGTAC AGAAGCTGGT AGATAAAATT
GCAGGCATAT TTGTACCTAT AGTTATTTTA ATTGCCATTA TTAGCTTAGG TGCATGGCTG
TTGTTTGGTG GCGAACATGC TTTTACACAG GGCTTACTTG CCATGGTTAC CGTATTGGTT
ATTGCCTGCC CTTGTGCGTT GGGCCTGGCA ACACCTACGG CAATTATGGT GGGTATTGGC
AAGGGTGCAG AGCACGGGAT ATTAATTAAA GATGCTGAAG CACTGGAACT GGGCCATAAA
GTAAATGCCA TTATTTTAGA TAAAACAGGG ACCATTACTG AAGGCAAGCC GGAAGTAACG
CATTTGGAAT GGGCAGACGG AAAGGATAAA GAACTGTTGC AAAGTGTATT GATTGCTTTA
GAACAGGCTT CAGAACATCC ATTGGCCGAA GCCATTGTGC GTAAGCTGAA AACAGATGGT
GTAAAAGGGT CTGCGGTAAC TGATTTTGAA AGCCTGACAG GTAAAGGTGT TAGCGCAGTA
TTTGAAGGAG AAAAATACTG GGCAGGAAGC CATAAGATTT TAAAAGATCA GCAGATACAG
GTGCCGGAAG CATTGCAGAC AAAAGTTGAT GAGCTGCAGC AGCTGGCACA AACGGTCATT
TATTTTACCA ATACAACACA AGTACTGGCC ATGGTAGCTA TTGCCGATCA GATCAAATCA
GGTTCAGCCA AAGCAGTGAA AGCTTTAAAG GGCGCAGGTA TTGAAATATA TATGCTTACC
GGTGATAACC AGCAAACTGC GGCATCGGTC GCCGGGCAGT CGGGAATTGA TCATTTTAAG
GCCGAAGTAT TGCCATCGGA CAAAGCTGAT TTCGTAAAGG AGCTGCAGGC GAAAGGAAAA
GTAGTCGCAA TGATAGGGGA TGGGATCAAC GACAGCCAGG CATTGGCCCA GGCCGATGTT
TCGATTGCGA TGGGTAGAGG CTCGGATATT GCCATTGATG TGGCTAAGAT GACATTGGTA
TCTTCCGATC TGCAGCAGGT ACCTAAAGCT TTACGCTTAT CAAAGCTTAC CGTTAAAACC
ATCCGTCAGA ACTTATTCTG GGCATTTATT TACAACCTGA TCGGCATTCC GATTGCTGCG
GGACTGTTGT ATCCGATCAA TGGGTTCTTA TTGAACCCCA TGATAGCCGG TGCGGCAATG
GCACTTAGTT CAGTATCGGT GGTAGGAAAC AGCCTGCGGC TGAAGCTGGC AAAACTGATA
TAA
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| Protein sequence | MNKNVETISM PVLGMTCAAC AVSIESMIAA QEGVDKAAVN YATQTVQVSY HPDVIQPDAM
QKAVQSIGYD LIVAQEGAAA LQEEAQKNNY TTLKKRMVWS LILTIPVVII GMFFMDMPNG
NYYMLALTTP VLFIFGRNFF INAWKQAKYG KANMDTLVAL STGIAYLFSV FNTFYPEFWH
SRGLHPHVYF EAAAVVIVFI MLGKLLEEKA KSNTSSAIKK LIGLQPKTVI VITKDGEKEI
AVADVHVTDQ ILVRAGEKIP VDGEVYEGGS YVDESMITGE PVAVAKKVGD KVFSGTINQK
GSFKFKAEKV GGETMLAQII KLVQDAQGSK APVQKLVDKI AGIFVPIVIL IAIISLGAWL
LFGGEHAFTQ GLLAMVTVLV IACPCALGLA TPTAIMVGIG KGAEHGILIK DAEALELGHK
VNAIILDKTG TITEGKPEVT HLEWADGKDK ELLQSVLIAL EQASEHPLAE AIVRKLKTDG
VKGSAVTDFE SLTGKGVSAV FEGEKYWAGS HKILKDQQIQ VPEALQTKVD ELQQLAQTVI
YFTNTTQVLA MVAIADQIKS GSAKAVKALK GAGIEIYMLT GDNQQTAASV AGQSGIDHFK
AEVLPSDKAD FVKELQAKGK VVAMIGDGIN DSQALAQADV SIAMGRGSDI AIDVAKMTLV
SSDLQQVPKA LRLSKLTVKT IRQNLFWAFI YNLIGIPIAA GLLYPINGFL LNPMIAGAAM
ALSSVSVVGN SLRLKLAKLI
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