| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3050 |
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| Symbol | |
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| ID | 8254166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3645774 |
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| End bp | 3646994 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936703 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003093310 |
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| Protein GI | 255532938 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.132301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0180542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGGA AAATATTCTT AAAAAACATG GCCCTGATGG CGCTGTTTCC ATCGGTATTC
ATTGCAGCCT GCAGTGAGGG GAAAAAGTCG GCAGCAGGGG TAGGAGGCCA AAAGTTACAG
ACTTTTACCT GCCCCATGCA CCCACAGGTC GTAAAAAATG AAATGGGGAC CTGTCCGATC
TGTGGCATGG ACCTGGTGCC GTTTGAAAAG AACAGCAACG ATAAGGCTTT AAAAGTAGAT
GAAAAGCGCC AGGCCCTGGC CAATATTGGC ATCCTTATGA TTGGCGAAAA TAGCCTTTCG
GGGGTTAAAC AGTTAAACGG CCGTCTGGTG GTTAACCCGG AACAGAGCAG TTACATTTCC
AGTAGGATTG CAGGGCGGAT AGAGCGGCTT TATGTTCAGG AAACAGGGGT TAAGGTAAAG
AAGGGACAAC CCTTGTATAA GCTCTATTCT GAACAACTGG CTACGCTTCA GCAAGAATAT
CTGATGGCTA TTGCCCAGGA AAAGCAATTT CAGGGTGATC AAATAGAAAG GCAGATTGTG
GCTTCGGCTA AACAAAAACT GTTGCTGTAC GGACAATCGG AACAAGAGGT AAAGCAACTG
GTTAAAACCC GGAAAAAAGA TCCATTTGTG GTTTTTTATG CGCCAGAAGG AGGGATAGTA
GCAGAAGTGT CGGTAACAGA GGGACAATAT GTAACCGAAG GTAGTCCGGT TTTGCGACTG
GAAGGCTATG CACAGTTATG GGTGGAAGCC GATGTGTATC CTGATGAGGC GAAAAATGTG
AAAGATGGCC AGAAAGTTAA AGTGGTAATC ACTGGCTGGG AAGATCAGCC CCAGGAAATG
ACCATTAGTT TTATTAATCC TGCACTGGCT TCGGGTACCC AGCTGATGCA AATCCGGGGT
TCCATCCCTA ATCCTGGAAA CCAGTGGCAA CCAGGCTTAC AGGCCAATGT TTTTTTGCCT
TCCGGAAATA AAAGTAAGGC ACTCACCTTA CCTGTTGATG CAGTAATACG AGATGGGAAG
GGGATGCACG TATGGATTAA AAAGGGGAAA GATAGCTTTG AGCCAAGGTT GGTGAAAACC
GGGCAGGAGA ACGATAACCA GGTAGAAATT TCTGCTGGCC TGAAAAATGG CGACCAGGTA
GTGGTAACGG GTGCTTACCT GTTGTATAGT GAATATATCC TTAAAAAAGG AAAAAATCCC
ATTGAAGGGT TAAAAATGTA A
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| Protein sequence | MERKIFLKNM ALMALFPSVF IAACSEGKKS AAGVGGQKLQ TFTCPMHPQV VKNEMGTCPI
CGMDLVPFEK NSNDKALKVD EKRQALANIG ILMIGENSLS GVKQLNGRLV VNPEQSSYIS
SRIAGRIERL YVQETGVKVK KGQPLYKLYS EQLATLQQEY LMAIAQEKQF QGDQIERQIV
ASAKQKLLLY GQSEQEVKQL VKTRKKDPFV VFYAPEGGIV AEVSVTEGQY VTEGSPVLRL
EGYAQLWVEA DVYPDEAKNV KDGQKVKVVI TGWEDQPQEM TISFINPALA SGTQLMQIRG
SIPNPGNQWQ PGLQANVFLP SGNKSKALTL PVDAVIRDGK GMHVWIKKGK DSFEPRLVKT
GQENDNQVEI SAGLKNGDQV VVTGAYLLYS EYILKKGKNP IEGLKM
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