Gene Phep_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3048 
Symbol 
ID8254164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3644696 
End bp3645127 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content37% 
IMG OID644936701 
Producthypothetical protein 
Protein accessionYP_003093308 
Protein GI255532936 
COG category[S] Function unknown 
COG ID[COG4731] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.904899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0139913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACT TAATTTTTTT ATTGCTGCTT ACGGCAATTT CCTTTACAGG CTTTGCCCAG 
AACAAAGATG CCATTATTGG CAAATGGATT AATTCTTCAG GTGAAGCACA TGTTGATATT
ACCAAAAAAG GTGAAAAATA CTTCGGTAAA ATTGTATGGT TAAAAGAACC TAAGGATGAA
AAGGGAAATG TAAAAACAGA TGTAAAGAAC CCGGATGAAA ACCAGAGGAA ACAACCTATT
CTTGGCCTTG AGATCTTGAA AAACTTTGTT TTTGATGAAG GGAAATGGAC TGACGGCAAG
ATCTACGATC CAAAATCAGG TAAAACCTAT AGTTGTAACA TGACTATGAA GGGGAATGAC
ATATTGAACA TGAGGGGCTA TATTGGCTTC TCGCTGATCG GCAGGTCGGA AACCTGGAAA
CGTGTAAAAT AA
 
Protein sequence
MKHLIFLLLL TAISFTGFAQ NKDAIIGKWI NSSGEAHVDI TKKGEKYFGK IVWLKEPKDE 
KGNVKTDVKN PDENQRKQPI LGLEILKNFV FDEGKWTDGK IYDPKSGKTY SCNMTMKGND
ILNMRGYIGF SLIGRSETWK RVK