| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3043 |
|---|
| Symbol | |
|---|
| ID | 8254155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3637330 |
|---|
| End bp | 3638802 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644936692 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093303 |
|---|
| Protein GI | 255532931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0217728 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGC ATTTTTTTTG GTCTAAGATA TTTTTAACCC TGTTGCTGCT GTGTTTAATA
CAAACTGGTT TTAGTCAGGA TCTGTCTTTT TTGTGGGACC AATATGGTAT TTACAGGGAG
CCAGCCTTGA AAGACCGTTT TTTTAAACAT AGTGATCTTG TTCCTTTGTT TCAAAAACTG
GAAAAATCGG GTCTTTTTAA AATCGAAATT GCAGGCGGTT CTGCACAGGG ACGCAGTGTC
TATCACCTAA CAGCTGGAAG GGGAAAGATA AAGGTATTGC TGTGGTCGCA AATGCATGGT
GATGAAACCA CAGCCACAAG AGCATTATTT GACTTTTTTA ATTTTTTAAA GGCCAATGAT
AAGAATGATG AGCTGAGAAA TAAACTGCTT GATCAGCTTG AACTTCATTT TGTGCCTATG
CTGAACCCGG ATGGAGCTGA AATGTTTAAA AGAAGGAATG CGTTGGATAT TGATATCAAC
AGGGATGCAA GAATGTTGGT TAGTCCGGAG GCAAGGATAT TAATGGACAT AGCCAAAAAA
ATTAAACCTG ATTTTGGGTT TAACCTGCAT GATCAGAGTA CACTGTATTC GGCTGGACGT
AGTAAAAATA CGGCAACAAT TTCTTTTCTG GATCCTGCCT TTAATTATGC AAAAGATATG
GATGACGTAC GTAAAAAAGC CAGGCAGGTA ATTTTACTGA TGAATAACGT GCTGCAAAAG
CTTATGCCTG ATAAAGTTGC AAAGTACAAT GATGATTATG ATCCAAGATG TTTTGGTGAT
ACTTTTCAAG GGATGGGTAT TGCAACTATC CTGATCGAAT CGGGTGGTTA TCCTGGAGAC
CCTGAAAAAG AATACATCCG TAAACTGAAT TTTTATGCTC TTTTAAGTGC GCTGAACTCC
ATAGCTGATC AGTCTTATCT GAAAGAAGAT GTTGTACAAT ATGAAAAGAT TCCGGAAAAC
AACAGGTCTT TATACAACGT GCTGATCCGA AATGTAAAAA TAACCAAACA GGGTAGTGTC
TTTTTAACCA ATTTGGGTAT AAACCATACG CAGGTTAAGG ACAGTGATTA CAGGGGAGTT
AGTTACCAGG GAAGTATTGA TGAACTGGGC GATGTAGAAA GGGTATATGG TTATGATGAG
GCAGATGCCG GAGATTTGAA TTATACGCCT GGTAAATTGA AAATACTGAC AAAAAAAGAG
TGGGAGAATT TAAACGCTGA ATCTGAAGTT CAACTGATAA GGGAAGGTTA TTTGTTTATA
AAATGGTCGG ATGCAAAGTC GCCCGCAGGT CCGGTAAAAA ACAGGTTGCT GAATCTGACG
AATAGTACTA GCGTGTCTGG ACAGGTTGGT TTAAATCAAG CAGCTAACTT TCTGCTTACC
AAACAGGATA AGCCGGTTTT TGCAATTATT AATGGTTTTT TACTGAAGTT GGACCAGCCG
GCAAAAGTAT TACACAATAC CTTTGGATAT TGA
|
|---|
| Protein sequence | MMKHFFWSKI FLTLLLLCLI QTGFSQDLSF LWDQYGIYRE PALKDRFFKH SDLVPLFQKL
EKSGLFKIEI AGGSAQGRSV YHLTAGRGKI KVLLWSQMHG DETTATRALF DFFNFLKAND
KNDELRNKLL DQLELHFVPM LNPDGAEMFK RRNALDIDIN RDARMLVSPE ARILMDIAKK
IKPDFGFNLH DQSTLYSAGR SKNTATISFL DPAFNYAKDM DDVRKKARQV ILLMNNVLQK
LMPDKVAKYN DDYDPRCFGD TFQGMGIATI LIESGGYPGD PEKEYIRKLN FYALLSALNS
IADQSYLKED VVQYEKIPEN NRSLYNVLIR NVKITKQGSV FLTNLGINHT QVKDSDYRGV
SYQGSIDELG DVERVYGYDE ADAGDLNYTP GKLKILTKKE WENLNAESEV QLIREGYLFI
KWSDAKSPAG PVKNRLLNLT NSTSVSGQVG LNQAANFLLT KQDKPVFAII NGFLLKLDQP
AKVLHNTFGY
|
|---|
| |