| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3023 |
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| Symbol | |
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| ID | 8254135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3615375 |
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| End bp | 3616145 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 644936672 |
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| Product | tryptophan synthase, alpha subunit |
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| Protein accession | YP_003093283 |
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| Protein GI | 255532911 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.64382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.04005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAGAT TACAACAATT ATTTCAGGAA AAGAAAAATA TACTTTCAAT ATATTACACA
GCTGGTTATC CCAATTTAGG CGATACTTTA GCTATTGCAG AAGAATTGGA AAAATCAGGG
GCCAATCTAT TGGAAATTGG TTTTCCTTAT TCAGATCCTG TAGCAGATGG ACCAATTATA
CAGGCCAGCA GCAAGCAGGC GCTAGATAAT GGAATGGATC TTAAACTCCT GTTTCAGCAA
CTAAAAGATT TGCGTAAAAC CGTCAGTATA CCTGTTTTAT TAATGGGCTA TGTAAACCCG
GTGTTACAGT TTGGTGTCGA GAATTTCTGT AAAGCCTGTG CTGAAGTTGG AGTAGATGGT
TGCATTGTCC CCGATTTGCC TATGGTAGAA TACGAAAGAC TTTACCAGCC AGTTTTTGCT
AAATATGGTT TAAGCAATAT ATTCCTGATT ACTCCGCAAA CGGCTGCAGA CCGCATTCAG
AAAATCGATA GTTTAAGTAA CGGATTCATC TATCTGTTAT CTTCATCGGC AACAACCGGG
CAAAATCTGC AGGTATCTAA CCATACTGAA GCCTATTTTT CAAGGATAGC AGATCTTAAA
TTAAAGAACC CAACTATGAT TGGTTTTGGT ATCAGTAGTA AAGAAACCTT TGATAAAGCC
TGTGAATATG CCAATGGGGC TATTATAGGT AGTGCATTTG TAAAAGCGCT GGATACAAGC
AATTTAAAAG GAAGTATTGA AACCTTTATG CAAAATTTTA AGCAGGATTA A
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| Protein sequence | MNRLQQLFQE KKNILSIYYT AGYPNLGDTL AIAEELEKSG ANLLEIGFPY SDPVADGPII
QASSKQALDN GMDLKLLFQQ LKDLRKTVSI PVLLMGYVNP VLQFGVENFC KACAEVGVDG
CIVPDLPMVE YERLYQPVFA KYGLSNIFLI TPQTAADRIQ KIDSLSNGFI YLLSSSATTG
QNLQVSNHTE AYFSRIADLK LKNPTMIGFG ISSKETFDKA CEYANGAIIG SAFVKALDTS
NLKGSIETFM QNFKQD
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