| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3021 |
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| Symbol | |
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| ID | 8254133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3613550 |
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| End bp | 3614170 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936670 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_003093281 |
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| Protein GI | 255532909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.539873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0225274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTATCA AAATCTATCC CGAAAATCCC AATCCAAAAG CAATCGAACA GATTGTTGAT
GTACTTAAAA AGGGTGGCTT AATCATATAT CCTACTGATA CGGTTTATGG TTTGGGCTGT
GACATTACGA ACCAAAAGGC CATCGAAAAG ATATGTCGTC TTAGGGGTAT AAAGCCTGAA
AAGGCCAATT TTTCTTTCAT ATGCTCGGAT TTAAGACATA TTTCCGATTT CATCAAACCT
ATTGATACAG CAACATTCAG GGTATTAAAA AAGGCCCTAC CGGGCCCTTT TACCTTTATT
TTAAATGCAA ACAATAACGT ACCCAAACTA TTAAGTTCCA ATAAAAAAAC AGTTGGTATT
AGGGTACCAG ATAATGACAT TGCCAGAGAA ATTGTAAGGC AACTTGGCAA CCCTATTCTA
TCTACGTCCA TCCGTGATGA CGATGAAGTA ATAGAGTATT CTACCGATCC GGAACTGATC
CATGAGAAAT ATGAAAATAC AGTTGATATG GTGATAGATG GTGGTTTTGG CGACAATGAA
GCTTCCACGG TAGTAGACTG TACTTCCGGC GACTTTGAGA TCATCCGTGA AGGAAAAGGA
GATTTGGATA GCTTTCTGTA A
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| Protein sequence | MLIKIYPENP NPKAIEQIVD VLKKGGLIIY PTDTVYGLGC DITNQKAIEK ICRLRGIKPE
KANFSFICSD LRHISDFIKP IDTATFRVLK KALPGPFTFI LNANNNVPKL LSSNKKTVGI
RVPDNDIARE IVRQLGNPIL STSIRDDDEV IEYSTDPELI HEKYENTVDM VIDGGFGDNE
ASTVVDCTSG DFEIIREGKG DLDSFL
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