| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3018 |
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| Symbol | sucC |
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| ID | 8254130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3608571 |
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| End bp | 3609761 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644936667 |
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| Product | succinyl-CoA synthetase subunit beta |
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| Protein accession | YP_003093278 |
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| Protein GI | 255532906 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.632407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0091052 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATATCC ACGAATATCA AGGTAAAGAA ATACTTAAAA GTTTTGGTGT AGCCGTACAA
GAAGGTATAG TTGCCGACAC GGTAGAGCAG GCTGTAGAAG CTGCTAAAAA AATGAAAACT
GACTACAATT CTGACTGGGT TGTAATTAAA GCTCAGATCC ACGCAGGTGG ACGGGGTAAA
GGCGGTGGTG TAAAACTAGC CAAGAACCTT GATGAGGTTA AGGAAAGAGC AACTGCAATT
TTAGGAATGC AGCTTGTAAC TCCGCAAACT GGTCCTGAAG GAAAAAAAGT TAACAAGATT
TTAGTTGCCC AGGATGTATA TTATCCGGGA GCTTCTGAAA CCAAAGAGTT CTATATAAGC
GTTTTATTGA ACCGTGGAAA TGGAAGAAAC ATCATCATGT ATTCGACTGA AGGTGGTATG
GACATTGAAG AAGTTGCGGA GCATACCCCT CATCTGATCT TTAAAGAAGA AATTGACCCT
AAAGTTGGCT TACAAGCATT TCAGGCACGC AAAATTGCTT TTAATTTAGG TTTAAGCGGT
GCGGCTTTTA AAGAAATGGT AAAATTTGTA ACTGCACTTT ACAAAGCTTA TGACAGCACG
GATTCTGCGA TGTTCGAAAT CAATCCAGTG TTAAAAACTT CTGATGACAA GATCATCGCT
GTTGATGCTA AAGTTGATCT GGATGAGAAT GCATTGTTCC GTCATCCTGA TTATGCAGCA
ATGCGCGATA AACTGGAAGA AGATCCTACA GATGTGGAAG CAAGTGAATC TAACCTTAAT
TATGTAAAGC TTGACGGGAA CGTGGGTTGT ATGGTTAATG GTGCCGGTTT AGCTATGGCT
ACTATGGACA TCATTAAGAT TGCCGGTGGC GAACCTGCTA ACTTCCTTGA TGTTGGTGGT
ACTGCAAATG CACAAACTGT AAAGGCTGGT TTTAACATTA TACTTAAAGA CCCCAACGTA
AAAGCAATCC TGATCAATAT ATTTGGTGGT ATTGTACGTT GTGACCGGGT TGCACAAGGA
GTAATAGATG CATATAATGA AATTGGTAAT GTTCCGGTTC CTATCATTTG CCGTTTACAA
GGTACCAATG CTGAAGAGGC GAAAAAACTG ATAGATGAAT CAGGATTGAA AGTTTATTCA
GCTATTGCTT TAAAAGAAGC ATCTGACCTG GTAACTAAAG TTTTAGCTTA G
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| Protein sequence | MNIHEYQGKE ILKSFGVAVQ EGIVADTVEQ AVEAAKKMKT DYNSDWVVIK AQIHAGGRGK
GGGVKLAKNL DEVKERATAI LGMQLVTPQT GPEGKKVNKI LVAQDVYYPG ASETKEFYIS
VLLNRGNGRN IIMYSTEGGM DIEEVAEHTP HLIFKEEIDP KVGLQAFQAR KIAFNLGLSG
AAFKEMVKFV TALYKAYDST DSAMFEINPV LKTSDDKIIA VDAKVDLDEN ALFRHPDYAA
MRDKLEEDPT DVEASESNLN YVKLDGNVGC MVNGAGLAMA TMDIIKIAGG EPANFLDVGG
TANAQTVKAG FNIILKDPNV KAILINIFGG IVRCDRVAQG VIDAYNEIGN VPVPIICRLQ
GTNAEEAKKL IDESGLKVYS AIALKEASDL VTKVLA
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