Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3017 |
Symbol | |
ID | 8254129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3607775 |
End bp | 3608530 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644936666 |
Product | hypothetical protein |
Protein accession | YP_003093277 |
Protein GI | 255532905 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.537648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0289582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAACT CACGGTATTG GATAAACTAT TTCAATCGTA ATCTTAAAAA CCAAAGGATC GACTGGAGTG TAAAACCCGA TCTTTCTAAA ATAGAAAAAC AGTATATACT AAAATCGTTA CAAGCCTGGC AATTAGGGGA AACATCAGAA GGCACCAATC TCATCAATGC GGCAACAAAA CATGCAAAAC AACTGAATGA CCCTTATTAT ACTAACGCCA TTAAACTTTT TATCAAAGAA GAGCAAAAAC ACGGAAGTAA CCTGGGGAGG TATATAGATC TTATTGGCGA ACAAAGAATT AAGAAGGATT GGGGCGATAG TTTATTCAGA AAAATAAGAG GTTTAAATAG GAATATGGAA TTCTGGACCC TTGCTGTAAT TACCGTAGAA AGTGCGGCGC AGATATTTTA CCAATGTTTA AAAGATGCAA CGGGATGCAG CTTACTTAAA CAGATATGTA CAGATATTTT AATTGATGAG GCTGCACATA TCACTTTTCA AATTGAACGA TTAAGTCTGA TATATCAATA TAAAAATCCA ATGATCAGGA CAAGTATTTA TTATTTTTAT AGTGTTTTCT ATTTTTCAAC AGCATTCACA GTTTGGATTG CCCATAAGAG ACTATTTAAG GCCGGACATG TCGATTTTAA TAATTACTGG ATGAAGATGA AACTAAAGTT TAAAAAGACC ATAAAAAAAC TGAAACCTGA ACAAGAAAAT ATAAAGCTTG AAAATACCTG TCGTCATTTG TTATAA
|
Protein sequence | MHNSRYWINY FNRNLKNQRI DWSVKPDLSK IEKQYILKSL QAWQLGETSE GTNLINAATK HAKQLNDPYY TNAIKLFIKE EQKHGSNLGR YIDLIGEQRI KKDWGDSLFR KIRGLNRNME FWTLAVITVE SAAQIFYQCL KDATGCSLLK QICTDILIDE AAHITFQIER LSLIYQYKNP MIRTSIYYFY SVFYFSTAFT VWIAHKRLFK AGHVDFNNYW MKMKLKFKKT IKKLKPEQEN IKLENTCRHL L
|
| |