Gene Phep_3017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3017 
Symbol 
ID8254129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3607775 
End bp3608530 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content33% 
IMG OID644936666 
Producthypothetical protein 
Protein accessionYP_003093277 
Protein GI255532905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.537648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0289582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACT CACGGTATTG GATAAACTAT TTCAATCGTA ATCTTAAAAA CCAAAGGATC 
GACTGGAGTG TAAAACCCGA TCTTTCTAAA ATAGAAAAAC AGTATATACT AAAATCGTTA
CAAGCCTGGC AATTAGGGGA AACATCAGAA GGCACCAATC TCATCAATGC GGCAACAAAA
CATGCAAAAC AACTGAATGA CCCTTATTAT ACTAACGCCA TTAAACTTTT TATCAAAGAA
GAGCAAAAAC ACGGAAGTAA CCTGGGGAGG TATATAGATC TTATTGGCGA ACAAAGAATT
AAGAAGGATT GGGGCGATAG TTTATTCAGA AAAATAAGAG GTTTAAATAG GAATATGGAA
TTCTGGACCC TTGCTGTAAT TACCGTAGAA AGTGCGGCGC AGATATTTTA CCAATGTTTA
AAAGATGCAA CGGGATGCAG CTTACTTAAA CAGATATGTA CAGATATTTT AATTGATGAG
GCTGCACATA TCACTTTTCA AATTGAACGA TTAAGTCTGA TATATCAATA TAAAAATCCA
ATGATCAGGA CAAGTATTTA TTATTTTTAT AGTGTTTTCT ATTTTTCAAC AGCATTCACA
GTTTGGATTG CCCATAAGAG ACTATTTAAG GCCGGACATG TCGATTTTAA TAATTACTGG
ATGAAGATGA AACTAAAGTT TAAAAAGACC ATAAAAAAAC TGAAACCTGA ACAAGAAAAT
ATAAAGCTTG AAAATACCTG TCGTCATTTG TTATAA
 
Protein sequence
MHNSRYWINY FNRNLKNQRI DWSVKPDLSK IEKQYILKSL QAWQLGETSE GTNLINAATK 
HAKQLNDPYY TNAIKLFIKE EQKHGSNLGR YIDLIGEQRI KKDWGDSLFR KIRGLNRNME
FWTLAVITVE SAAQIFYQCL KDATGCSLLK QICTDILIDE AAHITFQIER LSLIYQYKNP
MIRTSIYYFY SVFYFSTAFT VWIAHKRLFK AGHVDFNNYW MKMKLKFKKT IKKLKPEQEN
IKLENTCRHL L