Gene Phep_3003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3003 
Symbol 
ID8254115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3595812 
End bp3596141 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content38% 
IMG OID644936652 
Productprotein of unknown function DUF1508 
Protein accessionYP_003093263 
Protein GI255532891 
COG category[S] Function unknown 
COG ID[COG3422] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.589476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.537023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGT TCGAAATTAC TACCAGAAAA AACGGAGAGT TCCAATTCAA TTTAAAGGCG 
GGAAACGGAC AGGTTATTTT AAGCAGTGAA GGTTATACCA CTAAAAGTGC CTGCAATAAT
GGAATAGAGT CTGTCAGAAA AAATTCACAG GACGACAATA AATTTGATAG AAAGACCTCT
TCAAACGGGA AACCTTATTT TAACCTGAAG GCTTCCAACG GACAGGTTAT TGGCAATAGC
GAAATGTATG AAAGTGATAC GAGCAGAGAG AACGGAATAG AGTCTGTAAA GAAAAATGCA
GCAAATGCGG AAGTTTCAGA TCTGAGTTAA
 
Protein sequence
MGKFEITTRK NGEFQFNLKA GNGQVILSSE GYTTKSACNN GIESVRKNSQ DDNKFDRKTS 
SNGKPYFNLK ASNGQVIGNS EMYESDTSRE NGIESVKKNA ANAEVSDLS