Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3003 |
Symbol | |
ID | 8254115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3595812 |
End bp | 3596141 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644936652 |
Product | protein of unknown function DUF1508 |
Protein accession | YP_003093263 |
Protein GI | 255532891 |
COG category | [S] Function unknown |
COG ID | [COG3422] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.589476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.537023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTAAGT TCGAAATTAC TACCAGAAAA AACGGAGAGT TCCAATTCAA TTTAAAGGCG GGAAACGGAC AGGTTATTTT AAGCAGTGAA GGTTATACCA CTAAAAGTGC CTGCAATAAT GGAATAGAGT CTGTCAGAAA AAATTCACAG GACGACAATA AATTTGATAG AAAGACCTCT TCAAACGGGA AACCTTATTT TAACCTGAAG GCTTCCAACG GACAGGTTAT TGGCAATAGC GAAATGTATG AAAGTGATAC GAGCAGAGAG AACGGAATAG AGTCTGTAAA GAAAAATGCA GCAAATGCGG AAGTTTCAGA TCTGAGTTAA
|
Protein sequence | MGKFEITTRK NGEFQFNLKA GNGQVILSSE GYTTKSACNN GIESVRKNSQ DDNKFDRKTS SNGKPYFNLK ASNGQVIGNS EMYESDTSRE NGIESVKKNA ANAEVSDLS
|
| |