Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2995 |
Symbol | |
ID | 8254107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3586402 |
End bp | 3587628 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644936644 |
Product | ROK family protein |
Protein accession | YP_003093255 |
Protein GI | 255532883 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.403237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAA CCTTTTTCGA AGAACTCAAC AGCGAAAATG TAACTGGTGT AGCCTATAAG AATGTCAGTC TGAAAAAATA TGTAATCAGC TATTTTGCCA ATATAGGCAA TGCAACTATT GCAGACCTTT GTAAAGAACT GAACCTGAGC GCACCTAAGA TCACCAACCT CTTGAGCGAC CTTATCGCAG ACGGCCTGAT AAAGGATTAC GGCAAAGTTG AGTCTACAGG GGGCCGCAAA CCCAACTTAT ATGGCTTGGT GCCTGACTCT GCCTTTTTTA TTGGCGTGGA TATTAAACAG AACCATATCA ATATCGGGCT GTCAAATCTT CAAAAAAACC TGATTAGAAT AACTGAAAAA ATCCCTTATC ATCTTGATAA CAATAAAGAG TCGCTGGAAG CCTTATGTAA ACTGATAAAC GACTTTATCG GTGAGCTCAC CATCCCTAAA GAGAAACTAC TTGGACTTGG TATAAACCTT TCCGGCAGAA TCAATTATGC AACAGGATAT AGCTACAGTT TCTTTTATTT TAATGAAGAG CCCTTGAGCA AAATCATTGA GTCAAAAATT GGCATCCGTG TTTTCCTGGA GAACGACTCA AAATCCATGG CTTACGGAGA GTTTTCGGCA GGAGTTGTTG AGGCAGAAAA AAATGTACTG TTCCTTAACC TGGATCATGG TATTGGTTTA GGTATATTGG TAAACGGACA ACTGTACTAT GGCAAATCGG GCTACTCAGG TGAATTTGGA CACATTCCAA TGTTTGACAA CGAAATCATC TGCCGCTGTG GTAAAAAAGG CTGCCTGGAA ACCGAAGCAT CAGGATGGGC ATTAACGAGA ATGTTTAAAG AACGCCTATC TGAGGGCTCC TCTTCTATCT TGTCTCAAAA TAATACCGAT ACCGAAGATT TAAAAATGGA AGACATCATT AATGCAGCCA TTCATGATGA TGTGCTGGCA ATAGAACTGA TCGCGAAGAT TGGAGATAAT CTAGGTCGTG GTATTGCCTT GCTGATCAAC CTGTTTAATC CTGAACTGGT CATTTTAGGG GGAAGCCTTG CGGCTACAGA AGAATACATC AGACTGCCAA TCAAAAGTGC GATCAACAAG TATTCGTTAA GCCTGGTAAA CCAGGATACA AATTTAAAAA TGTCGAAATT AGGTGAAAGA GCCGGGATTA TTGGGGCATG TTTACTGGTA CGCAACCGTC TGCTGTCACT CAGTTAG
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Protein sequence | MGKTFFEELN SENVTGVAYK NVSLKKYVIS YFANIGNATI ADLCKELNLS APKITNLLSD LIADGLIKDY GKVESTGGRK PNLYGLVPDS AFFIGVDIKQ NHINIGLSNL QKNLIRITEK IPYHLDNNKE SLEALCKLIN DFIGELTIPK EKLLGLGINL SGRINYATGY SYSFFYFNEE PLSKIIESKI GIRVFLENDS KSMAYGEFSA GVVEAEKNVL FLNLDHGIGL GILVNGQLYY GKSGYSGEFG HIPMFDNEII CRCGKKGCLE TEASGWALTR MFKERLSEGS SSILSQNNTD TEDLKMEDII NAAIHDDVLA IELIAKIGDN LGRGIALLIN LFNPELVILG GSLAATEEYI RLPIKSAINK YSLSLVNQDT NLKMSKLGER AGIIGACLLV RNRLLSLS
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