Gene Phep_2995 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2995 
Symbol 
ID8254107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3586402 
End bp3587628 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content41% 
IMG OID644936644 
ProductROK family protein 
Protein accessionYP_003093255 
Protein GI255532883 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.403237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAA CCTTTTTCGA AGAACTCAAC AGCGAAAATG TAACTGGTGT AGCCTATAAG 
AATGTCAGTC TGAAAAAATA TGTAATCAGC TATTTTGCCA ATATAGGCAA TGCAACTATT
GCAGACCTTT GTAAAGAACT GAACCTGAGC GCACCTAAGA TCACCAACCT CTTGAGCGAC
CTTATCGCAG ACGGCCTGAT AAAGGATTAC GGCAAAGTTG AGTCTACAGG GGGCCGCAAA
CCCAACTTAT ATGGCTTGGT GCCTGACTCT GCCTTTTTTA TTGGCGTGGA TATTAAACAG
AACCATATCA ATATCGGGCT GTCAAATCTT CAAAAAAACC TGATTAGAAT AACTGAAAAA
ATCCCTTATC ATCTTGATAA CAATAAAGAG TCGCTGGAAG CCTTATGTAA ACTGATAAAC
GACTTTATCG GTGAGCTCAC CATCCCTAAA GAGAAACTAC TTGGACTTGG TATAAACCTT
TCCGGCAGAA TCAATTATGC AACAGGATAT AGCTACAGTT TCTTTTATTT TAATGAAGAG
CCCTTGAGCA AAATCATTGA GTCAAAAATT GGCATCCGTG TTTTCCTGGA GAACGACTCA
AAATCCATGG CTTACGGAGA GTTTTCGGCA GGAGTTGTTG AGGCAGAAAA AAATGTACTG
TTCCTTAACC TGGATCATGG TATTGGTTTA GGTATATTGG TAAACGGACA ACTGTACTAT
GGCAAATCGG GCTACTCAGG TGAATTTGGA CACATTCCAA TGTTTGACAA CGAAATCATC
TGCCGCTGTG GTAAAAAAGG CTGCCTGGAA ACCGAAGCAT CAGGATGGGC ATTAACGAGA
ATGTTTAAAG AACGCCTATC TGAGGGCTCC TCTTCTATCT TGTCTCAAAA TAATACCGAT
ACCGAAGATT TAAAAATGGA AGACATCATT AATGCAGCCA TTCATGATGA TGTGCTGGCA
ATAGAACTGA TCGCGAAGAT TGGAGATAAT CTAGGTCGTG GTATTGCCTT GCTGATCAAC
CTGTTTAATC CTGAACTGGT CATTTTAGGG GGAAGCCTTG CGGCTACAGA AGAATACATC
AGACTGCCAA TCAAAAGTGC GATCAACAAG TATTCGTTAA GCCTGGTAAA CCAGGATACA
AATTTAAAAA TGTCGAAATT AGGTGAAAGA GCCGGGATTA TTGGGGCATG TTTACTGGTA
CGCAACCGTC TGCTGTCACT CAGTTAG
 
Protein sequence
MGKTFFEELN SENVTGVAYK NVSLKKYVIS YFANIGNATI ADLCKELNLS APKITNLLSD 
LIADGLIKDY GKVESTGGRK PNLYGLVPDS AFFIGVDIKQ NHINIGLSNL QKNLIRITEK
IPYHLDNNKE SLEALCKLIN DFIGELTIPK EKLLGLGINL SGRINYATGY SYSFFYFNEE
PLSKIIESKI GIRVFLENDS KSMAYGEFSA GVVEAEKNVL FLNLDHGIGL GILVNGQLYY
GKSGYSGEFG HIPMFDNEII CRCGKKGCLE TEASGWALTR MFKERLSEGS SSILSQNNTD
TEDLKMEDII NAAIHDDVLA IELIAKIGDN LGRGIALLIN LFNPELVILG GSLAATEEYI
RLPIKSAINK YSLSLVNQDT NLKMSKLGER AGIIGACLLV RNRLLSLS