| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2990 |
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| Symbol | |
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| ID | 8254102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3578190 |
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| End bp | 3581423 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644936639 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093250 |
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| Protein GI | 255532878 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.366302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTGA ACAACTATAT CTTATTTGTT GCTGCTGTAT TTTGCTTTTT TTTCCAGAAA
GTAAAGGCCC AGCAAACCGT TCAGCGCGAA TGGACCATAA CGGGTAAAGT ACTTACAGCC
GACAAGCAGC CATTACCCGG GGCCAGTATT TTATTAAAGG GAACCAAAAC TTCTACCATG
ACGCTTAGTG ATGGCCAGTT TTCGATTAAA GTACCGGCAG TGGCGGGTGA GCTGGTGTAT
GCTTACATCG GCATGAAGCC ACAAACCATT GCTTTCCAGA ATCAGGGTAC CTTTACAGTG
GTGCTCGAAG AAGAAAACAA CAACTTAAAC GAAGTGATTG TAGTCGGTTA TGGTACACAA
AAGAAGGAGA ACCTGACCGG AGCAGTAGAC CAGGTGACGG CAGATGTTTT CAAAAATAGG
CCGATCACTA ACCTTGCCCA GGGTTTACAA GGTGCCATGC CCAATTTAAA CCTTACACCG
GCTGATGGCA AGCCCAATCA GTCACCTGCT TTTAACATTC GTGGGGCAAC ATCTGTAGGT
CAGGGTGGTA GTGCATTGGT ACTTATTGAT GGGGTAGAAG GTAATCCTGC TTTGTTGAAC
CCACATGATA TTGAAACAGT GTCTATTCTT AAAGATGCTG CTTCAGCCTC TATTTATGGT
GCGCGTGGTG CGTTTGGAGT GGTACTCATC ACTACTAAAA AGCCAGTTAA AGACCGTACT
GAAATCAATT ACTCAAGTAA TTATGCGATT AAGAACCCAA CTACGGTGCC CAATTTTGTA
ACTGATGGAT ACCAATGGGC TTCTATGTTT AACGAAGCAT TCTCAAGCTG GAACAATTAT
GCCAGTACGC CGCAAAACGT AAACAAGACA CTTCGTTTTT CTCCTGAATA CCTGGAAGAA
TTGAGGAAGC GTTCATTAGA TTCTTCTCTT CCTAAAACTG CTGTTGATCC TGTAACCGGA
GAGTATGTTT ATTATGAAAA CCACAACTGG ATGGATGACC TTTATAAAGA CCATACTTAT
TCACTTGACC AAAACATTTC TGTCTCGGGA AGCAGCAACA AGACCAGTTT TTATGTCACT
GGAAGATACC TTGACCAACC AGGATTATTC AGGTACAATT CTGACGATTA CAAAATGTAC
AACCTGCGTG CAAAAGGGTC TATTGAGCTT TATCCGTGGT TAACCCTGGG TAACAATATC
GATTTTTCGA GTGTGCAGTA TCATACTCCG ATGAATGTTG GTGAGGGTGG AGGAATCTGG
AGAAATATGG TTGCTGAAGG TCCGCCTATG GCACCTATGT TTAATCCTGA TGGTACACTT
ACCCATTCTG CTGCTTACAC CGTTGGCGAT TACTGGTATG GAAAAAACGG AATGGACTAT
GACCGCCGTG TTTTAAGAAA CTCCACCAAT TTTGCCACTA AATTCTTTAA CAATACACTT
CGCATCAAAG GAGATTTTAC TTTTCAGAAT ACCCTGAATA ATGAAACCCG TGTTCGTGTT
CCGGTACCTT ATAGCCGGGT GCCGGGCGTA ATTCAGTACC TGGGTACCAA TTATAACGAT
ATCCGGGAAA TTTTCAGGGA AACGCAATAT ATCAATACCA ATATCTATGG CGAATACGAA
AAAACGTTCA ATAATAAGCA TGATTTTAAA GCATTAGCCG GATTCAATTA TGAATTGAGT
ACTTATAAAA GGGTAGGAGC AGAAAGAAAT GGCCTGATCT ATGAAGATGC AGAAGATTTA
AATCTTGCCC TTGGCCAGTC TATCGCTGCT ACCGGTGGTT ATGAGCAGTG GAATATCAGT
GGTGGATTTT TCAGGTTTAA TTATGCGTAT GACAAACGTT ACCTGATAGA AATCAACGGA
CGCTATGATG GGTCTTCTAA ATTTCCGTCA AATGAGCGCT ATGCATTCTT CCCTTCTATC
TCGGCAGGCT GGAGGATATC TTCAGAACCT TTCTGGAAAG TAAATAAAGA CCTCATTTCA
GATTTTAAGG TGCGTGCATC GTATGGTTCA TTGGGTAATG GTAACATCAA CTCTTATGTA
TTCCAGGAGT TATTGACGCT AAATACTTTG CCAAGGGTAA TCAATGGCGT GCAGCCTGCT
TATACACGTA ATCCAAGTGT GATTCCTGAT GGACTTACCT GGGAAACAGC TACAACAAGC
AATATCGGAC TTGACCTGTC CATGTTAAAG AACAGGCTTT CGATTTCGGG AGATGCCTAC
ATCAGGAAAA CAGTAGACAT GTTTACACCG GGTGTGGAGC AGCCTGCAGT GTTTGGTGCA
GCTTCTCCGC GTGGAAACTA TGCAGATATG GAAACCAAGG GATGGGAACT TTCTGTTAGC
TGGAATGATC ATTTTACATT GAAAAACAAG CCATTCAACT ATAGTGTAAA AGCCGTAGTT
TCTGACAACA TTTCTACCAT TCTGAAATAC AACAACCCGA ACAAAAGGTT GGATGATTAT
TATGAAGGAC AACGCCTGGG CGAAATCTGG GGATATGTTA CAGAAGGTTT TTTTACTTCT
GCTGATGACA TCAGAAGATC TGCCGACCAA AGCCTGTTCA GTTCTACTGC AACAGGTGCG
TGGCGAATCG GCGATATCAA ATTCAAAGAC ATCAATAACG ATGGCGTAAT TGATTATGGC
GACAATACTG CGAACAAGCC CGGCGATCGT GTGATTATTG GTAACGACCA GCCACGTTAC
CGCTTCGGGC TCAGTTTAGG TGCCGACTGG AACAACTTCT TTGTAAGTGG TTTCTTCCAG
GGGGTAGGAA AACAAAGCTG GTATCCAAGT CGTGGTGCAA ATACTTTCTG GGGACAGTAT
AACGCGCCTT ATGGTCATCC ACCTGCATCA CAGATCGGCA ACATCTGGTC GGAAAACAAT
CCTGATGCTT ATTTCCCAAG ATATACCGGA TACCTGGCAT GGGCTGCCGG TGGTACCCTG
CGTGAAGTAC AGACCCGCTA CCTGCAGAAC ATAGCTTATG TAAGGTTGAA AAACATCCAG
GTTGGTTATA CGCTGCCGGC TAGTATCAGT TCAAAGTTCC GTGCAGCTAA AGCAAGCATT
TATTTCTCGG GCGAAAATCT ATTTACCTAT TCGCCGATGC ATAAGATCAC TAAAGATATT
GATGTCGAAA ATACAGGTGA TTCTGACCAG GATCTGGCAG ACTCTAATCA GGGTGACGGA
TTTAACTACC CGATGATGAA AAGCTATTCT CTGGGTTTAT CGATTACATT TTAA
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| Protein sequence | MKLNNYILFV AAVFCFFFQK VKAQQTVQRE WTITGKVLTA DKQPLPGASI LLKGTKTSTM
TLSDGQFSIK VPAVAGELVY AYIGMKPQTI AFQNQGTFTV VLEEENNNLN EVIVVGYGTQ
KKENLTGAVD QVTADVFKNR PITNLAQGLQ GAMPNLNLTP ADGKPNQSPA FNIRGATSVG
QGGSALVLID GVEGNPALLN PHDIETVSIL KDAASASIYG ARGAFGVVLI TTKKPVKDRT
EINYSSNYAI KNPTTVPNFV TDGYQWASMF NEAFSSWNNY ASTPQNVNKT LRFSPEYLEE
LRKRSLDSSL PKTAVDPVTG EYVYYENHNW MDDLYKDHTY SLDQNISVSG SSNKTSFYVT
GRYLDQPGLF RYNSDDYKMY NLRAKGSIEL YPWLTLGNNI DFSSVQYHTP MNVGEGGGIW
RNMVAEGPPM APMFNPDGTL THSAAYTVGD YWYGKNGMDY DRRVLRNSTN FATKFFNNTL
RIKGDFTFQN TLNNETRVRV PVPYSRVPGV IQYLGTNYND IREIFRETQY INTNIYGEYE
KTFNNKHDFK ALAGFNYELS TYKRVGAERN GLIYEDAEDL NLALGQSIAA TGGYEQWNIS
GGFFRFNYAY DKRYLIEING RYDGSSKFPS NERYAFFPSI SAGWRISSEP FWKVNKDLIS
DFKVRASYGS LGNGNINSYV FQELLTLNTL PRVINGVQPA YTRNPSVIPD GLTWETATTS
NIGLDLSMLK NRLSISGDAY IRKTVDMFTP GVEQPAVFGA ASPRGNYADM ETKGWELSVS
WNDHFTLKNK PFNYSVKAVV SDNISTILKY NNPNKRLDDY YEGQRLGEIW GYVTEGFFTS
ADDIRRSADQ SLFSSTATGA WRIGDIKFKD INNDGVIDYG DNTANKPGDR VIIGNDQPRY
RFGLSLGADW NNFFVSGFFQ GVGKQSWYPS RGANTFWGQY NAPYGHPPAS QIGNIWSENN
PDAYFPRYTG YLAWAAGGTL REVQTRYLQN IAYVRLKNIQ VGYTLPASIS SKFRAAKASI
YFSGENLFTY SPMHKITKDI DVENTGDSDQ DLADSNQGDG FNYPMMKSYS LGLSITF
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