| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2989 |
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| Symbol | |
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| ID | 8254101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3576392 |
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| End bp | 3578158 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936638 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093249 |
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| Protein GI | 255532877 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.157394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA TATTTTTTGT TTCCATACTG GCAGTTTTGT TTGCATGCAG TAAACTGGAC
CAGCAACCAA AATCAACAGT GGGCAAAGAG GCCGTGTTCC AGAGCGAAAA AGGACTGGAA
CTGTATGCCA CCTCATTTTA TACCTTACTT CCAACTTATA CAGACATCCT CAGGGGAGAT
AACATGTCTG ATTATATCGC CCGCAAGGAT GTTCCTGATT TCATTAGGGA TGGTGCTTAT
GGGCCGCGTC AAAGCACAGG ATGGACATGG ACAGATCTTA GAAATATCAA TTATTTCCTG
GAGAACAATG TCAATACTTC TATCCCTAAG GAAGTGAGGG AACATTACAA TGGCTTGGCC
AGATTTTTTA GAGCCTGGTT TTATTTTGCA AAAGTAAAGC GCTTTGGTGA TGTGCCTTGG
ATCAACCGGA CTTTTGAAGT GAATGATCCT GAAATGATGA AAGGTCGTGA TTCACGTGTA
TTGGTGATGG ATTCTGTACT CAGAGACCTT GATTATGCTA CGCAGCATAT CCGCACTACA
GAAGATGGCT CCAGATCAAT GATTACCAAA TTCGTTGCCT ACGCATTTAA ATCGAGGGTT
TGTTTGTTTG AAGGAACTTT TCGTAAATAT CATACCAATT ATGGCTTACA ACAAACGGCA
GCCAATTGGT TAACTGAAGC TGCAACTGCC GCCAAGATTG TTATGGATCA GAATAAGTTT
TCACTTTATA TCGGTGGTGC GGACTCGAAA CCCTACCGTG AACTGTTTGT AAGCAAAGCG
CCAATAGCAT CTGAAGTGAT GCTGGCCAAT ATCTATAGTG ATGCACTTGG GATTTTCCAT
GATGCCAACT GGTATTATAC CAGCGCTACT TATGGTGACA GGGCCAGTTT TACCAGGTCA
TTTATCAACA CTTACTTAAA TATAGACGGA ACACCCTTTA CCAATAAGGC CGGCTACAAA
ACCATGATTT TTGCTGATGA AGTAGAAAAC AGGGATAAAC GACTGGAACA AACTATTCGC
ACAAAAAGTT ACAATAGGAT TAATGGTGGA AACCTGCTGG TTTCACCACC ACTTTTCTCT
TATACTTATA CAGGTTATCA ACCTACTAAA TGGGTACTGG ACGATACTTT TTACGATAGT
GGAAGTATGA ACAATAACAT CATCCCGATA TTCAGATATG CAGAGGTGCT GTTAAATTAT
GCAGAAGCAA AGGCCGAATT GGGTACATTA TCTGATACAG ACTGGAATAC AACAATAGGG
GCACTAAGAA GGAGGGCAGG CATTACACAA AATACGGCTA CCAAGCCAAC ACTTGCCGAT
CCTTATTTAA TGGCAGAATA TTTCCCTGGT ATTACTGACC CTTCTATTCT GGAAATCAGG
AGGGAACGTG GAATTGAACT TGCATTGGAA GGATTCAGAT TTTATGACCT GGTACGCTGG
AAAAGTGGAA AGCTGATAGA AAAGACATGG AATGGTATGT ATGTTCCGGC ATTGAATACC
CCATTAGACC TGAATAAAGA CGGCGTAATG GATGTTGCCT TTTATAGAAC ACTACCTAAT
AGCCAGGTAC CCGGGGTAAC TTATATGAAT GTTGCTGAAA CCGTCAGCGG CCGTCCAAAT
GCTATGGTAT TGTCTGAGGG CGATAAAGGG GAGATCAAAT GGCTGGTTAC TACTCCTAGG
GTTTGGCAAG ATAAATTTTA CCTGTATCCT ATTCCGGAAA GTGACCGTTT GATGAATCCT
GCGTTGGGGC AAAACCCTGA CTGGTAA
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| Protein sequence | MKRIFFVSIL AVLFACSKLD QQPKSTVGKE AVFQSEKGLE LYATSFYTLL PTYTDILRGD
NMSDYIARKD VPDFIRDGAY GPRQSTGWTW TDLRNINYFL ENNVNTSIPK EVREHYNGLA
RFFRAWFYFA KVKRFGDVPW INRTFEVNDP EMMKGRDSRV LVMDSVLRDL DYATQHIRTT
EDGSRSMITK FVAYAFKSRV CLFEGTFRKY HTNYGLQQTA ANWLTEAATA AKIVMDQNKF
SLYIGGADSK PYRELFVSKA PIASEVMLAN IYSDALGIFH DANWYYTSAT YGDRASFTRS
FINTYLNIDG TPFTNKAGYK TMIFADEVEN RDKRLEQTIR TKSYNRINGG NLLVSPPLFS
YTYTGYQPTK WVLDDTFYDS GSMNNNIIPI FRYAEVLLNY AEAKAELGTL SDTDWNTTIG
ALRRRAGITQ NTATKPTLAD PYLMAEYFPG ITDPSILEIR RERGIELALE GFRFYDLVRW
KSGKLIEKTW NGMYVPALNT PLDLNKDGVM DVAFYRTLPN SQVPGVTYMN VAETVSGRPN
AMVLSEGDKG EIKWLVTTPR VWQDKFYLYP IPESDRLMNP ALGQNPDW
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