Gene Phep_2980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2980 
Symbol 
ID8254092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3558732 
End bp3559592 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content48% 
IMG OID644936629 
Producthypothetical protein 
Protein accessionYP_003093240 
Protein GI255532868 
COG category 
COG ID 
TIGRFAM ID[TIGR03519] Bacteroidetes-specific putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000308677 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGG GGGGCAGCAC AGTAAAAGCC CAGTTAAACC CCTTATCTTC GCAATATTAT 
ACCAACCAGT ACCTGATCAA CCCTGCCTTT GCTGGTGCAG ACCAGGGCTT AAAATTAAAC
GGGGCTTACC GTAAGCTATG GAGCAATGTA CCCGGATCGC CATTGACCCA AAACCTGACG
GCCGATTATG GTTTTAACAA AGTTGGCCTG GGCCTTACGG TAAACAATGA AAGTGCAGGT
TTGCAGCGCC AGACCAGGGT AGTGGGCAGT TATGCCTATC ACCTCAAACT GAACGACAAC
AACCATCAGC TGCATTTTGG GGTATCCCTG GGTTTCATGA GCCAGCGCCT GGAAAATGCA
GACATTTATG GCAACCCCAG CGACCCGATG GTAGGGCAGT ACAACGACCG TAAAACCTAT
CTGGACGGAG ATTTTGGTGT AGCCTATACT TCCGGTAAAC TGAACATACA GGCTTCTGTG
CCCAACCTGA AAAGTGTATT GAAAAAGGAT GTGATCAAAC TGGCCGATGT AGCTACCTTT
TATACGGCAG CAAGTTACAA GATCGGGATC AGCGAAGGAG CAGAGGGTAT GGATGTAGAA
CCTAAAGTAG CCTACAGGGG TGTACAGGGC TTTGACAACA TCTGGGATGC AGGGGCACAG
TTTGGCATTG CCAACAAACA GGTGTTTTTA CTGGCCATGT ACCACAGTAC AGAAAATGCA
ACTTTTGGCC TGGGCATGGA CTTCAGAAAG AAATACCTGA TCAGCGGCAC CTATACCACC
CAGACTTCAG CTTTGAGCAG TTATACCAAT GGCAGTTTTG AACTGAACCT GAGATTGAAC
CTGAGTAAAA TTGAAAAATA A
 
Protein sequence
MAMGGSTVKA QLNPLSSQYY TNQYLINPAF AGADQGLKLN GAYRKLWSNV PGSPLTQNLT 
ADYGFNKVGL GLTVNNESAG LQRQTRVVGS YAYHLKLNDN NHQLHFGVSL GFMSQRLENA
DIYGNPSDPM VGQYNDRKTY LDGDFGVAYT SGKLNIQASV PNLKSVLKKD VIKLADVATF
YTAASYKIGI SEGAEGMDVE PKVAYRGVQG FDNIWDAGAQ FGIANKQVFL LAMYHSTENA
TFGLGMDFRK KYLISGTYTT QTSALSSYTN GSFELNLRLN LSKIEK