Gene Phep_2979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2979 
Symbol 
ID8254091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3557677 
End bp3558564 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content46% 
IMG OID644936628 
Producthypothetical protein 
Protein accessionYP_003093239 
Protein GI255532867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000369688 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAT TTGCACAGCC TTTTTCTGCT GGCACAAAAA AAGTATTGTT CCTGGGCAAC 
AGCATTACCT ATGCCGGTCA GTATATTGTT GATATAGAAG CCTATTGCAT GATGAACTAT
CCAGGTCAGA AAATCGAATT CATCAATATG GGCCTGCCCA GCGAAACCGT TTCCGGTTTG
TCCGAAGCAG GGCATGCGGG TGGTAAGTTT CCGAGGCCCG ACCTTCATGA ACGGCTGGAC
CGTGTAATGG CACTAACCAA ACCTGACCTG GTATTTGCCT GTTACGGAAT GAACGATGGT
CTGTACATGC CATTCGACAA TGTCCGTTTT CAAAAATTTA AGGATGGCAT CAGCTGGCTG
CACGATAAAT ATGCCGCTAA GGGCATCCGC ATTGTTCACC TTACCCCGCC GGTTTATGAT
GAACTTAGAG GTGGAAAAAA GGGCTATTCA GAAGTTCTGG ACAAGTATTC TGATTGGTTG
CTTGGTCAGA AGAAAGCAAA GAACTGGGAG GTAGCAGATC TGCATTATCC CATGAAAAAA
TACCTGGAAG CACACCGGAA GGTAGACGCG GCCTTAAACA TCAATGGATT TTATTTGGCT
GCCGATGGTG TACACCCCGG TGAAACCGGG CACTGGATAA TGGCAAAAGC GCTTTTACTG
TACCTGGGCG AGAAAAAAGT CAGCACGGCA GCCGATCTGC CAGGTGCAGT AACACATTCC
AAGAAATATG AGCTCATAAA GCTGATTGCC CAAAAGCAGG ACCTCATGAA GGATGCATGG
TTAACTGCTG CAGGGCACAA ACGTCCAATG AAAAAAGGAT TGCCCCTGGA GGAAGCAACA
ATTAAAGCAG CTGAAATTGA TGAACAGATC AGCAGCTTAA TGAAATAA
 
Protein sequence
MSSFAQPFSA GTKKVLFLGN SITYAGQYIV DIEAYCMMNY PGQKIEFINM GLPSETVSGL 
SEAGHAGGKF PRPDLHERLD RVMALTKPDL VFACYGMNDG LYMPFDNVRF QKFKDGISWL
HDKYAAKGIR IVHLTPPVYD ELRGGKKGYS EVLDKYSDWL LGQKKAKNWE VADLHYPMKK
YLEAHRKVDA ALNINGFYLA ADGVHPGETG HWIMAKALLL YLGEKKVSTA ADLPGAVTHS
KKYELIKLIA QKQDLMKDAW LTAAGHKRPM KKGLPLEEAT IKAAEIDEQI SSLMK