| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2967 |
|---|
| Symbol | |
|---|
| ID | 8254078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3539647 |
|---|
| End bp | 3540981 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644936615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093227 |
|---|
| Protein GI | 255532855 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAT TAAAATATAA CACATTTGCA ACAGCATCGG GTATAGCATT TGTGCTGTTC
CTACTTGCAT TGTCTTCTTG CAAAAAAGAG AATGGCACTC CCATTACTGA TCCAACACCA
AAAGATACTA CACTTAAAGT AGCTTCTTTA TCTGCCACCA CCTTACACTA TGGCGACACG
CTTAGCATTA CTGGCAGCAA TTTTTCTACT GTAGTCCTTA ATAATACCGT TACTATTAAT
GAGGTGGCAG CCACTTTGCA ATCAGCCACG GCTACACAGC TGAAGATAAT TGTTCCTGCT
GTGGGAGCTG TTAGCGGTGA AGTAAAAATA AAAACAGGCA ACCAGACTGT GAGTGGTGGC
AACATTACTT ATGTGCCTGA TGTATTTGTA GCTGGTTCTC AGGATAATGG CGCACACCCT
TTGGCTACCT ATTGGAAAAA CAGCACTGCT GTTAAACTAA GCACAGAAGA ATCAGCATTG
AGTTCAATTT TTATAAATGG CAATGATGTG TATGCAGCAG GATGGGAAAG GACTAACAAT
TTACAATTGG CCAATTATTG GAAAAATGGC ACTAAAACCA CGCTTGGTAC CGGCGCATCT
GCTGCCAATA GCATTTCTGT AAACGGTAAC GATGTGCATG TTGGCGGCTG GGAAATCATC
AACGGATTTG ACCTTTCCCG GTACTGGAAA AACGGGACAG GTACAACCAT AAGTGTTAAT
GATCCCATTG TATCGCAGAT CGTTACCGGT AATGGCTCTT GTACAGGAAT TTATATAAAT
AACAACAATG TTTATGCTGT TGGAAGTTAT CGCAACTCAC AGGGGAGGTT TTCGCCCTGG
GAATTTACTA ACGGGACAAT ACCAGCTAAT ACCATTCCCA ATAACGATAA GCATTGCTTT
GCCAATGCAG TTTTCGCAAG CGGAAGCGAT AAGTATGTGG CAGGCAACCA AAACAATGCA
ACAACAGGCT TGGCTATGGC TACCATCTGG AAAAACGGAA CCGCTACAAC ACTAACCGCA
GGTACGGCTT CGGTAGGCGT GGCAACCGCT GTTTTCGTAA AGGGAAACGA TGTATATGTG
GCAGGATATG AACAGGAAAA TTATTATGGT GGCGGGCCAA CTTTTGCAAA ATATTGGAAA
AATGGGGTAG CAGTAAAATT ATCAACAACA TCATCTAGTG CTACAGGTAT TGCGGTTTTT
GGTAATGATG TTTATGTATC GGGATGGGAA AACAACGGAG CATACAATGT AGCAAAATAC
TGGAAAAATG GAGTGGCTGT CAATTTGGGA AATACCACAC TGAATTCATC AGGTAATGCT
ATTGTTGTGC GATAA
|
|---|
| Protein sequence | MKTLKYNTFA TASGIAFVLF LLALSSCKKE NGTPITDPTP KDTTLKVASL SATTLHYGDT
LSITGSNFST VVLNNTVTIN EVAATLQSAT ATQLKIIVPA VGAVSGEVKI KTGNQTVSGG
NITYVPDVFV AGSQDNGAHP LATYWKNSTA VKLSTEESAL SSIFINGNDV YAAGWERTNN
LQLANYWKNG TKTTLGTGAS AANSISVNGN DVHVGGWEII NGFDLSRYWK NGTGTTISVN
DPIVSQIVTG NGSCTGIYIN NNNVYAVGSY RNSQGRFSPW EFTNGTIPAN TIPNNDKHCF
ANAVFASGSD KYVAGNQNNA TTGLAMATIW KNGTATTLTA GTASVGVATA VFVKGNDVYV
AGYEQENYYG GGPTFAKYWK NGVAVKLSTT SSSATGIAVF GNDVYVSGWE NNGAYNVAKY
WKNGVAVNLG NTTLNSSGNA IVVR
|
|---|
| |