Gene Phep_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2956 
Symbol 
ID8254067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3524991 
End bp3525836 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content44% 
IMG OID644936604 
Productmetallophosphoesterase 
Protein accessionYP_003093216 
Protein GI255532844 
COG category[R] General function prediction only 
COG ID[COG1409] Predicted phosphohydrolases 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0819511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGACA GGAGAGGTTT TATTAAAGGC AGTATGGCAG GAATGCTGCT GGCGGGGCTT 
TCCCCATCGG TTTCTGCACT TGCTGCTGTT CATCAGCAGC ATATGGACAA AGCAGACAGG
AAATTGAAGT TGCGTTTTGC CATTGCTTCA GACGGGCATT ATGGGCAGCC GGGCACAGCC
TATAAAAAAG ACCACGAAAA TATGGTAGGC TGGCTGAATG AAGCCCATGC AAAGATGCCG
CTTAATTTTG TGGTCATTAA CGGTGACCTG GTGCACGACA GGCCTGAATT GTTGGCAGTG
GTTAAAAAAG AACATTACGA TCAGCTTCAT GTTCCCTTTT ACGCAGTTCC GGGCAACCAC
GATCACGCCG ATGCTGCGAT CTGGAAGTCT GTATTCGGCT ATGCAGATAA TTTTTCAATT
CAAAAAAATG AGGTAGGGCT GGTGTTTGCG AATACCTCAG ACACTAAAGG TAAATATCTT
TGTCCCGACA ATTCTTTTTT AAAGCAGGAA CTGGAGAAGT TTAAAGGACT TAAAACTGTG
TTTGTGGTGT TACATATTCC TCCCCATTTC TGGGTGCCGG AAAGTCCTTT TGTAGATTGT
CCGGACACCA TTAAACTGTT ACATAGCTAT CCCAACGTTA AAGCTGTTTT TCATGGTCAT
GACCATAGCC TGGATGCAGT TTTTTATACC AATAAATTAC CGCATTTTTT TGATGCCCAC
ATAGGTGGTA ACTGGGGAAC GGCTTATCGT GGTTATCGGA TAGTAGAAGT TGACGAGGAT
GATAAGGTAA CCACTTATCA GGTAAATGCA AGCGGAACTC CCTTACTCAA TGAAACTAAA
TTTTAG
 
Protein sequence
MSDRRGFIKG SMAGMLLAGL SPSVSALAAV HQQHMDKADR KLKLRFAIAS DGHYGQPGTA 
YKKDHENMVG WLNEAHAKMP LNFVVINGDL VHDRPELLAV VKKEHYDQLH VPFYAVPGNH
DHADAAIWKS VFGYADNFSI QKNEVGLVFA NTSDTKGKYL CPDNSFLKQE LEKFKGLKTV
FVVLHIPPHF WVPESPFVDC PDTIKLLHSY PNVKAVFHGH DHSLDAVFYT NKLPHFFDAH
IGGNWGTAYR GYRIVEVDED DKVTTYQVNA SGTPLLNETK F