Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2956 |
Symbol | |
ID | 8254067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3524991 |
End bp | 3525836 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936604 |
Product | metallophosphoesterase |
Protein accession | YP_003093216 |
Protein GI | 255532844 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0819511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGACA GGAGAGGTTT TATTAAAGGC AGTATGGCAG GAATGCTGCT GGCGGGGCTT TCCCCATCGG TTTCTGCACT TGCTGCTGTT CATCAGCAGC ATATGGACAA AGCAGACAGG AAATTGAAGT TGCGTTTTGC CATTGCTTCA GACGGGCATT ATGGGCAGCC GGGCACAGCC TATAAAAAAG ACCACGAAAA TATGGTAGGC TGGCTGAATG AAGCCCATGC AAAGATGCCG CTTAATTTTG TGGTCATTAA CGGTGACCTG GTGCACGACA GGCCTGAATT GTTGGCAGTG GTTAAAAAAG AACATTACGA TCAGCTTCAT GTTCCCTTTT ACGCAGTTCC GGGCAACCAC GATCACGCCG ATGCTGCGAT CTGGAAGTCT GTATTCGGCT ATGCAGATAA TTTTTCAATT CAAAAAAATG AGGTAGGGCT GGTGTTTGCG AATACCTCAG ACACTAAAGG TAAATATCTT TGTCCCGACA ATTCTTTTTT AAAGCAGGAA CTGGAGAAGT TTAAAGGACT TAAAACTGTG TTTGTGGTGT TACATATTCC TCCCCATTTC TGGGTGCCGG AAAGTCCTTT TGTAGATTGT CCGGACACCA TTAAACTGTT ACATAGCTAT CCCAACGTTA AAGCTGTTTT TCATGGTCAT GACCATAGCC TGGATGCAGT TTTTTATACC AATAAATTAC CGCATTTTTT TGATGCCCAC ATAGGTGGTA ACTGGGGAAC GGCTTATCGT GGTTATCGGA TAGTAGAAGT TGACGAGGAT GATAAGGTAA CCACTTATCA GGTAAATGCA AGCGGAACTC CCTTACTCAA TGAAACTAAA TTTTAG
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Protein sequence | MSDRRGFIKG SMAGMLLAGL SPSVSALAAV HQQHMDKADR KLKLRFAIAS DGHYGQPGTA YKKDHENMVG WLNEAHAKMP LNFVVINGDL VHDRPELLAV VKKEHYDQLH VPFYAVPGNH DHADAAIWKS VFGYADNFSI QKNEVGLVFA NTSDTKGKYL CPDNSFLKQE LEKFKGLKTV FVVLHIPPHF WVPESPFVDC PDTIKLLHSY PNVKAVFHGH DHSLDAVFYT NKLPHFFDAH IGGNWGTAYR GYRIVEVDED DKVTTYQVNA SGTPLLNETK F
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