| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2955 |
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| Symbol | |
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| ID | 8254066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3522551 |
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| End bp | 3525007 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936603 |
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| Product | 40-residue YVTN family beta-propeller repeat protein |
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| Protein accession | YP_003093215 |
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| Protein GI | 255532843 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0137484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA ATTTTAGTGT AATCATCATG AAGAAATTAT GTATCCTGTT GCTGCTGATC
AGCGCATCCA GTAATTTAAT TTTCGCACAG TTACCCGGAA AAGTTCATGG CAGCAGTCGG
GTACTTTTGC CCAATGGCTG GTCCTTAAGT CCGGTTGGCA GGTCGCTACC TTTAGGAGAC
CTGCCCCTGA ACATCCAGCT TTCCCACGAT AAAAAGAAGA TTGCGGTGAC CAATAATGGC
CAAAGTAAGC AAACTATCCA GCTGATAGAT GTTAAAACGG AACGTATTAC CGACGAAAAA
GAGATTGGGA AATCCTGGTA TGGCCTGCAG TTTAATGAAA AGGATAATAA GCTCTATGTT
TCGGGGGGCA ATGACAATAT CATCCTGGTT TATCCGGTTG AAAAGGGTAA ACTGCTTGAA
CCTGATACCA TCAGGCTGGG AAAAGCCTGG CCGGTAAAGA TCAGTCCGGC CGGACTTGCC
CTTGATGACC TGAACCAGGT TTTGTATGTA GTTACCAAGG AAGACAATAG TCTTTATATC
GTTGACCTGA CTACCAGAAA AACACTTAAA AAAGTTGCTT TAGGCTCAGA AGCTTATTCC
TGTATCCTTT CGCCCGACCG GAAGATTTTA TACATTTCAC TTTGGGGAGC CAATAAGGTA
GTCCTGCTGG ATACAAAGCT GGGGCAGATT ACGGATAGCA TTGCTACGCA ATATGCGCCT
AATGAGCTGT TGCTGAATAA AAAAGGCGAT TATCTGTTTG TAGCCAATGG TGGCGATAAC
TCGGTTTCCA TCATCAATAC GCAGACAAAA AAAGTAGTTG AGGTGATCTC ATCAGCAGTA
CATCCAACAC AACTGACCGG CTCAACAACT AATGCCCTGG CCTTGTCAGA CAATGAACAG
ACACTTTACA TTGCAAATGC CGATAACAAT TGCCTTGCGG TATTTAATGT TGCTAAAATA
GGCGAAAGTG TAAGCCTGGG TTTTATCCCG ACAGGCTGGT ACCCAACGAG TGTTAAGTAT
TGCAAAAACA GGATCTGGGT AGCAAATGGA AAAGGCTTTA CCAGCATGGC AAATCCTAAA
GGCCCGCAAC CCATCAGCAA AGTAGACAAC AGCGAGCTGC ATGAAGGCTC CACTCCGGAT
AAAAGGTTGC AGTATATTGG TGGCTTGTTT AAAGGAACTT TGTCTATTGT TGATGATCCG
AAAGAAACGG TGCTGAAAGA ATATACACAA ATGGTGTATA GTAACACACC TTTCAATAAG
CAGCAGCAGG CACCATCAGC ATCCAATCCT ATACCCTTTA AAAAAGGTGA TGTAAGCCCT
ATAAAGTATG TTTTTTATAT TATTAAGGAA AACCGGACTT ATGATCAGGT ATTGGGAGAT
GTTAAAAAAG GAAACGGAGA TCCTAAGCTT TGTCTTTTTC CGGAAAAAGT AACGCCAAAC
ATCCATGCTT TAGCTGAAGA ATACGTACTG CTGGATAATT TTTATGTGGA TGCCGAGGTG
AGTGCCGATG GCCATAACTG GAGTATGGGC GCCTATGCGA ATGATTATGT CGAAAAAACC
TGGCCCACAC AATATGGTAA ACGTGGCGGG GCCGGAGATT ACGGCGGAAA CCGGAAAATT
ACTTATCCCA GGGATGGTTT TATCTGGGAT TACTGTAAAA GGGCGGGGGT CAGTTACCGG
AGCTACGGCG AATTTGCAAA TGGCAAGACC GCGGTTATTG CAGCTTTGAA AGACCATTTT
TGTGTCGGTT TTCCTTCTTT TGACTTTGAA ATAAAAGATA CCACCCGTTG TGCCATCTGG
ATAAAAGATT TTGACCGGCT GCTTGCAAAA GATGAAGTTC CGCAATTTAA TACCATTAAA
TTCCCTAATG ACCATACCAG CGGACAAAAG AGGGGGCAGA TTTCGCCCCT GGCTGCTGTT
GCCGACAATG ACCTTGCTGT GGGATTGTTC ATTGAACACC TCTCGCACAG CAGGATCTGG
AAAGAATCAG CTGTTTTTAT ACTGGAAGAT GATGCCCAGA ACGGACCCGA CCATGTGGAT
GCACATCGTT CGCCCGCACT GGTCATCAGT CCCTATACCA AAAGGAACCA GGTAGTGAGC
ACGATGTATT CTACCAGTGG GTTTTTGCGG ACTATGGAAC TGATACTTGG ACTGCCACCA
ATGAGCCAGT ATGATGCAGC AGCAATACCC TTATACGATT GTTTTACAGC AACACCGGAT
TATACCCCCT ATAATCACCG GAAGGCAGGG GTAAACCTCG ATACCAGGAA TGTAGCATTG
AATAAAAGTG CTGAACTTTC GGAAACTTTT AGTTTTGCGA AAGAGGATGA GGCGCCCGAC
CTGCAACTGA ACCAGGTGGT ATGGAAATCT GTAAAAGGGG AGGATGCTGT AATGCCTGCC
CCCAGAAGAA GTGCATTTGT GATTGCAGAA AAGAAAAAGA AAGATGATGA CGATTAA
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| Protein sequence | MKLNFSVIIM KKLCILLLLI SASSNLIFAQ LPGKVHGSSR VLLPNGWSLS PVGRSLPLGD
LPLNIQLSHD KKKIAVTNNG QSKQTIQLID VKTERITDEK EIGKSWYGLQ FNEKDNKLYV
SGGNDNIILV YPVEKGKLLE PDTIRLGKAW PVKISPAGLA LDDLNQVLYV VTKEDNSLYI
VDLTTRKTLK KVALGSEAYS CILSPDRKIL YISLWGANKV VLLDTKLGQI TDSIATQYAP
NELLLNKKGD YLFVANGGDN SVSIINTQTK KVVEVISSAV HPTQLTGSTT NALALSDNEQ
TLYIANADNN CLAVFNVAKI GESVSLGFIP TGWYPTSVKY CKNRIWVANG KGFTSMANPK
GPQPISKVDN SELHEGSTPD KRLQYIGGLF KGTLSIVDDP KETVLKEYTQ MVYSNTPFNK
QQQAPSASNP IPFKKGDVSP IKYVFYIIKE NRTYDQVLGD VKKGNGDPKL CLFPEKVTPN
IHALAEEYVL LDNFYVDAEV SADGHNWSMG AYANDYVEKT WPTQYGKRGG AGDYGGNRKI
TYPRDGFIWD YCKRAGVSYR SYGEFANGKT AVIAALKDHF CVGFPSFDFE IKDTTRCAIW
IKDFDRLLAK DEVPQFNTIK FPNDHTSGQK RGQISPLAAV ADNDLAVGLF IEHLSHSRIW
KESAVFILED DAQNGPDHVD AHRSPALVIS PYTKRNQVVS TMYSTSGFLR TMELILGLPP
MSQYDAAAIP LYDCFTATPD YTPYNHRKAG VNLDTRNVAL NKSAELSETF SFAKEDEAPD
LQLNQVVWKS VKGEDAVMPA PRRSAFVIAE KKKKDDDD
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