| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2953 |
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| Symbol | |
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| ID | 8254064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3520868 |
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| End bp | 3521950 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936601 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003093213 |
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| Protein GI | 255532841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAA TTGTAATGCT TACAGGCTTG TGTGCCGTTT TGTGCCATAT CAGCTGTACC
TCAAAAAAAG AAGCAAAGGA AGAGACCGGC AAATATGCGG TTACCAGTCC TTTAAAAATA
GATACCTCAT TTACCAAAGA ATATGTTTCG CAGATCAAAT CTGTACGGAA CATCGAGATC
AGGGCACAGG AAAAAGGATA CCTTCAGCAG ATCTATGTAG ATGAAGGCCA TTTTGTGAAA
GCGGGTCAGC TGCTGTTCAA AATTATGCCT AAAATGTATG AAGCTGAATT GCTGAAAGCC
CAGGCCGAAA CCAAGGCTGC AGAAATAGAA CTGCAGAATA CCAAACTGCT GGCCGATAAG
AATGTGGTCT CAAAAAATGA ACTGGCTATG GCCCAGGCCA AACTGGAACA GGCGAAAGCA
GAGACGGCAC TGGCCAGACT CCACCTGTCG TTTACCGAAA TCAGGGCTCC TTTTGATGGG
ACAATTGACC GCATCCCATT AAAGCTGGGC AGTCTTGTAG ACGAGGGTGA GCTGCTTACC
AGCCTGTCCG ATAACAGCCA GATGTTTGCT TATTTCAATG TGTCTGAACC AGAATACCTG
GATTACGAAA CCAATACCAG AAACCGGGGC AACAGCAAGG TAAGTTTAGT GCTGGCCAAC
AGCCAGCCGC TAAAGTACAA AGGTGAAGTG GAGACCATAG AAAGTGAATT TAACAATGAA
ACCGGAAATA TTGCCTTCCG GGCAAGGTTT CCGAATCCTG ACAGGTTGCT AAAGCATGGC
GAAACGGGCA AGGTTCAGAT GACTGTCCCG CTCAGAAATG CCCTGGTGAT ACCACAGAAG
GCAACTTATG AAATCCAGGA TAAACTATAT GTTTTTGTGG TGGATAAAAA TGGCAAAGTC
AAATCAAGGA ACATCAGTAT CAGTAACCAG ATGCCTGATC TGTATGTGGT AGGCAATGGC
CTTTCTGAAA ATGACAGGAT TCTTCTGGAA GGTGTCCAGA AGGTAAAAGA TGACGATAAG
ATCGTCTACA ATTTTGTAGC ACCTAAGGAA GTCATTTCCC GTCTGCAATT GAGAGCGGAA
TAG
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| Protein sequence | MKRIVMLTGL CAVLCHISCT SKKEAKEETG KYAVTSPLKI DTSFTKEYVS QIKSVRNIEI
RAQEKGYLQQ IYVDEGHFVK AGQLLFKIMP KMYEAELLKA QAETKAAEIE LQNTKLLADK
NVVSKNELAM AQAKLEQAKA ETALARLHLS FTEIRAPFDG TIDRIPLKLG SLVDEGELLT
SLSDNSQMFA YFNVSEPEYL DYETNTRNRG NSKVSLVLAN SQPLKYKGEV ETIESEFNNE
TGNIAFRARF PNPDRLLKHG ETGKVQMTVP LRNALVIPQK ATYEIQDKLY VFVVDKNGKV
KSRNISISNQ MPDLYVVGNG LSENDRILLE GVQKVKDDDK IVYNFVAPKE VISRLQLRAE
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