| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2951 |
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| Symbol | |
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| ID | 8254062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3516250 |
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| End bp | 3517683 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936599 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003093211 |
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| Protein GI | 255532839 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.503662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAC TTGGTAGATA TAAATATATC GCAGTGCTGG GCATTTGCCT GGCTGCTGCA
AGCTGTAAGC TTCCGGCCGT CACACAGCGG GCCGAAAACA GGTCGGTACC GGTATCTTAT
GGTAACAGTC TGGATACCGT TAATGTAGCC ACTGCCGCGT GGCGGAACTT TTTTACGGAT
AAGGACTTAC AGCACCTGAT AGATACTGCA TTGATGCGCA ATCAGGAACT GCTGATCACT
TTGCAGGAAA TTGAGATTGC AAAAAATGAC ATCAGGAGCA GACAAGGGCA ACTGTTGCCT
GCGGTAAATG GAAAAATTGG TGCCGGTATT GAAAAAGTTG GAAGATATAC CAGTCAGGGT
GCCGGTGATG CCAGCACAGA AATAGCTCCT GGAAAAGAAA TGCCCGATCC GCTGATGGAT
TATACGGCAG TGCTGACTGC CAATTGGGAG GCCGACATCT GGAAAAAACT GCACAATGCA
AAAAAAGCAG CGGTCAGCCG GTATTTGTCG ACCATAGAAG GTAAAAATTT TGTGCTGAGC
AACCTGATTG CTGAAGTGGC CAATTCTTAC TATGAGCTGC TGGCCCTCGA CAATCAGCTG
GAGATTGTTA AACAAAATAT CGAACTGCAA AAAAATGCCC TGGAAATTGT AAAGATTCAA
AAAGAGGCAA CCCGGGTAAC AGAGCTGGCA GTCCAGAAAT TTAAAGCAGA AGTACTGAAT
TCCCAGGGAC TGGAGTTTGA TATCCTTCAG AAGATCACAG AAACGGAGAA CAGGATCAAC
TTTTTACTGG GCAGGTATCC GCAACCCATA CAGAGGGATA AAAACAGCTT TTTAACCCTG
ATGCCGACAG CAGTAAGTAC CGGTATCCCG TCCCAGTTAC TGGCCAACCG GCCTGATGTC
AAAAAGGCTG AACTGGAGCT GGCTGCAGCC AAACTGGATG TTAAAGTTGC AAGGGCCGAA
TTTTATCCTT CTTTCGGCAT TTCTGCTGCT TTAGGCTTTC AGGCATTTAA GCCATCTTAC
CTGGTTAAAT TTCCGGAATC AGTGCTTTAT TCGCTTGCCG GAGATCTTGC CGGTCCACTC
ATCAACAGAA AGGGCATCAA GGCAGAGTTT TACAATGCCA ATGCGCGCCA GCTTCAGGCC
ATGTACAATT ATGAACGGAC CATTCTAAAT GCATATCTGG AGGTTTCTGC CCAATTGTCG
AAAATCAGTA ACCTGGAAAA AAGTTACGAC CTGAAATCGA AAGAAGTAAA GGCACTCAGC
AGCTCAATAG ATATTTCCAA TGATCTGTTT AAGTCGGCAC GTGCCGATTA TCTGGAAGTT
TTAATGACCC AAAGAGATGC GCTGGCAGCC AAACTGGAAC TGATAGAAAC CAAAAAGGGA
CAGCTCAATG CTGTCACCAA TATCTATAGG GACCTCGGTG GAGGCTGGAA ATAA
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| Protein sequence | MYKLGRYKYI AVLGICLAAA SCKLPAVTQR AENRSVPVSY GNSLDTVNVA TAAWRNFFTD
KDLQHLIDTA LMRNQELLIT LQEIEIAKND IRSRQGQLLP AVNGKIGAGI EKVGRYTSQG
AGDASTEIAP GKEMPDPLMD YTAVLTANWE ADIWKKLHNA KKAAVSRYLS TIEGKNFVLS
NLIAEVANSY YELLALDNQL EIVKQNIELQ KNALEIVKIQ KEATRVTELA VQKFKAEVLN
SQGLEFDILQ KITETENRIN FLLGRYPQPI QRDKNSFLTL MPTAVSTGIP SQLLANRPDV
KKAELELAAA KLDVKVARAE FYPSFGISAA LGFQAFKPSY LVKFPESVLY SLAGDLAGPL
INRKGIKAEF YNANARQLQA MYNYERTILN AYLEVSAQLS KISNLEKSYD LKSKEVKALS
SSIDISNDLF KSARADYLEV LMTQRDALAA KLELIETKKG QLNAVTNIYR DLGGGWK
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