Gene Phep_2949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2949 
Symbol 
ID8254060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3513853 
End bp3515094 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content46% 
IMG OID644936597 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003093209 
Protein GI255532837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TCACAAAAGA GAAAAGTGCA GCAGCTTACC TGTTCAGTGC CCCTGTTATT 
GTAGCTTCTT TGGGCTATTT TGTAGATATA TACGACCTGC TTTTATTTGG GATCGTAAGG
ATTCCCAGTT TAACCGAACT GGGACTTGAT GAGGCGGCGG TATCCATTGA GGGGGCAAGT
ATTTTGAACT GGCAAATGAC CGGCTTATTG CTAGGTGGGA TACTATGGGG CATTCTGGGA
GATAAAAAAG GGCGTCTGTC GGTGCTTTTT GGCTCTATCA TTACCTATTC TATTGCAAAC
TTCGCCTGCG GTTTTGTACA CGATGTAACC ATTTACAAAG TATTGCGCTT TATTGCGGGT
ATTGGTCTGG CCGGTGAGCT GGGGGCAGGG ATTACCCTGG TATCGGAAAG TCTGCCCAAA
AAATTAAGGG CAATAGGCAC TTCGGTAGTG GCAGGAGTAG GCCTGCTTGG TGCTGTGGTT
GGCTATTTTA CAGTAGAGCT GTTTAGCTGG AGGAATGCTT ATTTTATTGG TGGGGGTATG
GGTATTTTAT TGTTGTTTTT AAGAATAGGT GTATTTGAAT CGGGGATGTT CCATGCCATG
AAAGAAAAAC ACCATGTGGC CAAAGGTAAT TTTCTTTCTT TTTTTACCAA AAAGAGTCGC
TTGCTGCTGT ACCTTAAATG TATCGGAATA GGTCTGCCCA CCTGGTATGT CATCGGGATA
CTGGCCACGT TCAGCAACGA GTTTGGCAAA GCGCTGGGCA TTACAGAAGC CATAAAACCC
GGACTGGCGG TAATGTGGTG CTATGTAGGC TTATCGGCCG GCGATCTGGT GAGCGGCTTG
CTGAGTTACT GGCTCCAATC GAGGATCAGG GCCGTTACTT ATTTAATGAC TTTTACTGCA
ATTGGCAGTA TCATATACCT GTATGGAGGA ATCCATACCG CTACTGGGCT TTATGCAATG
TGCCTTTGGA TAGGTTTTGG AATCGGCTAC TGGGCCATGT TTGTAACCAT AGGGGCAGAA
CAGTTTGGCA CCAATGTAAG GGCAACTGCC GCCACAACCA TACCGAATAT GGTAAGGGGT
ACAGTGGTAT TGATGACCAC TTTATATGCA GCTTTAAAAC CGGGCCTGCT GGCACTCAAT
GCTGCAGCGG TAGTCGGACT GCTATGCTTT GGTATAGGCT TCTACTGTAT CAGGACCATT
CCCGAGACCC ATCATAAAGA CCTCGATTTT GTAGAGGATT AA
 
Protein sequence
MTNLTKEKSA AAYLFSAPVI VASLGYFVDI YDLLLFGIVR IPSLTELGLD EAAVSIEGAS 
ILNWQMTGLL LGGILWGILG DKKGRLSVLF GSIITYSIAN FACGFVHDVT IYKVLRFIAG
IGLAGELGAG ITLVSESLPK KLRAIGTSVV AGVGLLGAVV GYFTVELFSW RNAYFIGGGM
GILLLFLRIG VFESGMFHAM KEKHHVAKGN FLSFFTKKSR LLLYLKCIGI GLPTWYVIGI
LATFSNEFGK ALGITEAIKP GLAVMWCYVG LSAGDLVSGL LSYWLQSRIR AVTYLMTFTA
IGSIIYLYGG IHTATGLYAM CLWIGFGIGY WAMFVTIGAE QFGTNVRATA ATTIPNMVRG
TVVLMTTLYA ALKPGLLALN AAAVVGLLCF GIGFYCIRTI PETHHKDLDF VED