Gene Phep_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2940 
Symbol 
ID8254051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3504531 
End bp3505637 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content47% 
IMG OID644936588 
Producthypothetical protein 
Protein accessionYP_003093200 
Protein GI255532828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.459011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGA AACTCATTTT TTTAATGCTG CTGCTGTCGG CAACAGGGCA TTTCTGTATT 
GCCCAGAAGG TAATAGAATA TAAAACATGG AACCCCGTCA ATGAAAAGAC CAGTGTTGTG
GGCGGACAAG GTTGGCATAG CGGACTAAAG GACTATTACG ACCGTTTGCC CGCAAAAGCA
GAGCAAACAG CCAGAAAAGT GGTTTGGAAC CTTTCTAAAA ACAGTACAGG ACTTAACCTC
CGGTTTAAAT CGAATGCAGC AGAAATTGTA GTCAGGTATC AGGTTACAGG GCCTGTACAA
ATGTCGCACA TGCCGGCAAC AGGGGTAAGC GGGCTGGACC TGTATGCCAA AGGCCCAGAT
GGCCAGTGGC TTTGGTCGGC AGGCAAATAT AGCTTTGGCG ATACCTTGGT TTACCGCTTT
ACGGGCCTGG AAAGTGCTGA CCTTAAAGAA AGAACTTATA CCCTTTTTCT TCCTTTATAC
AATGCTGTAA AATGGATGGA AATAAGCGTG CCTAAGCAAA GCGCTTTTAC GCCTTTAGCA
CCGGTTGCGC AAAAACCCAT TGTGGTTTAT GGAACCTCTA TTGCACAGGG GGCATGCGCC
AGCCGCCCCG GCATGGGCTG GACAAACATC CTGAGCCGTA AACTGGATGC ACCCGTCATC
AACCTTGCTT TTTCCGGCAA CGGGCGCATG GAAAAAGAGA TTGTAGAACT GCTGCCTGAA
ATTGATGCCC GCCTGTATGT GCTGGACTGC CTGCCCAATC TGACAGGTGA GGCCTTTACC
AACGAGATCA TCAAACAAAA AATTGAAGAT GCAGTGGCAC ACCTGCAATC GAAAAAACCT
GGTGTTCCCA TTTTGCTGAC AGAACATGAC GGCTATACCG ACGGTGGCAT CAACCAGGAG
CGGACAAAGG CTTATGAACG GGTAAATGCC GTGTTAAAAG CCACTTTTGC AGCTTTAAAA
GCAAAAGGTA TAAAAAACAT TTATTACCTG TCTAAAGCAG AAATTAACCA GGACATCGAC
ACAATGGTGG ATGGTACCCA TCCGAATGAT ATCGGCATGA TGCGTTATGC CGATGCCTAT
GAAAAGGTAA TCCGGAAAAT AAAATAG
 
Protein sequence
MYKKLIFLML LLSATGHFCI AQKVIEYKTW NPVNEKTSVV GGQGWHSGLK DYYDRLPAKA 
EQTARKVVWN LSKNSTGLNL RFKSNAAEIV VRYQVTGPVQ MSHMPATGVS GLDLYAKGPD
GQWLWSAGKY SFGDTLVYRF TGLESADLKE RTYTLFLPLY NAVKWMEISV PKQSAFTPLA
PVAQKPIVVY GTSIAQGACA SRPGMGWTNI LSRKLDAPVI NLAFSGNGRM EKEIVELLPE
IDARLYVLDC LPNLTGEAFT NEIIKQKIED AVAHLQSKKP GVPILLTEHD GYTDGGINQE
RTKAYERVNA VLKATFAALK AKGIKNIYYL SKAEINQDID TMVDGTHPND IGMMRYADAY
EKVIRKIK