| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2939 |
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| Symbol | |
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| ID | 8254050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3503659 |
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| End bp | 3504528 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936587 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003093199 |
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| Protein GI | 255532827 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0806864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.433201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTC AACTGCTCAA AGTTTCCAAT ACGCTGGTCA ACTCATTTAG TGCCAGAAGA
GATAAAGTAC CTTATATCAA CAACCGCTGG CATTACCATG CTGAAGTGGA GCTGATCTAT
TTCAAAAAAG GCAATGGCAC CCAGTTTATC GGCGATAGCA TCAAGCGTTT CAATTCGGGG
GATATTGTAT TGGTAGGTGC CCATTTACCG CATTACTGGA AATTTGACGA CATTTATTTT
GATGAAGGTG AGCAGAACAA TGCCGATGTG GTGGTGGTCC ATTTTTGTGA AAATTTCTGG
GGCAACCATT TTCTTTCGCT GCCCGAAAAT AAAGGCATCA GGCTGACCCT GGAAAAAGCC
CAGCGCGGGA TACAGATCAG GGATAACAGC AAGCGGCAGA TTGGGGGCCT GATGGAAGAC
ATATTGCAGG CAACGGGCCC ATCAAGGATT ATTTTATTGA TGGAAGCCTT ACTGGCCATA
GAGGGCAGTA CGCAGGACAA ACCTTTATCT TCTATGGGTT TCCGCAACAA TTTCGAAGAA
ACGGAAAATG ACAGGATCAA TGCCATCTAC AACCATTCGC TGATGAACTT TAAGCGGAAG
ATCCCGATGG AAGAGATGGC TGCAGTGGCG AACATCAGTC CGAATTCCTT TTGCAGGTAT
TTTAAATCCA GGACACGGAA AACCTATACC CAGTTTATCA GCGAGATCAG GGTTGGTCAT
GCCTGCAAAC TGCTGATTGA AGACAGCATG AACGTAAAAC AGATCTGTTA TGAAAGCGGC
TTTCATAATT TTGCCAGCTT TCATAAACAT TTTAAGATCA TTACCGGGCA AAGCCCGCTC
AACTACCAGA AGTCATACCT CAGCAAATAA
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| Protein sequence | MKPQLLKVSN TLVNSFSARR DKVPYINNRW HYHAEVELIY FKKGNGTQFI GDSIKRFNSG
DIVLVGAHLP HYWKFDDIYF DEGEQNNADV VVVHFCENFW GNHFLSLPEN KGIRLTLEKA
QRGIQIRDNS KRQIGGLMED ILQATGPSRI ILLMEALLAI EGSTQDKPLS SMGFRNNFEE
TENDRINAIY NHSLMNFKRK IPMEEMAAVA NISPNSFCRY FKSRTRKTYT QFISEIRVGH
ACKLLIEDSM NVKQICYESG FHNFASFHKH FKIITGQSPL NYQKSYLSK
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