| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2938 |
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| Symbol | |
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| ID | 8254049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3502712 |
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| End bp | 3503278 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936586 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_003093198 |
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| Protein GI | 255532826 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.275648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.408246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGA GGAAATTAAT TGTTGCAATT ACCGGTGCCA GCGGATCTGT TTATGCCAAA
CTGTTGCTGG ATAGCTTGTT AAGGTTAGCT GATCAGATCG AAAAAGTGGG GGTAGTCATG
TCAGACAATG CAAAAGAGGT ATGGCGTTTT GAGCTGGGCA ACCAGGATTA TAACCATTAT
CCCTTTACTT TTTATCCAAA AATGGATTTC AATGCGCCCT TTGCTTCTGG TTCTGCAAAA
TATGACACCA TGATTATTAT TCCCTGTTCA ATGGGAACCT TAGGGCGCAT CGCACAGGGA
ATTTCAAATG ACCTGATCTC CAGGGCGGCT GATGTGATCT TAAAAGAACG CCGGAAACTG
ATCGCCGTAG TGCGCGATAC CCCCTTTAGC CTCATCCACA TCAATAACAT GAAAACCCTT
ACTGAAGCCG GTGGAATCAT CTGTCCTGCA AGTCCTTCCT TTTACAGTAT CCCCAAAACC
ATTGAAGAGC TGGCGCAAAC TGTAGTAAGC CGCGTGATCG ATCTGGCCGG ACTGGAGCAG
GATAGTTACC GCTGGAATGA AGAATAA
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| Protein sequence | MNKRKLIVAI TGASGSVYAK LLLDSLLRLA DQIEKVGVVM SDNAKEVWRF ELGNQDYNHY
PFTFYPKMDF NAPFASGSAK YDTMIIIPCS MGTLGRIAQG ISNDLISRAA DVILKERRKL
IAVVRDTPFS LIHINNMKTL TEAGGIICPA SPSFYSIPKT IEELAQTVVS RVIDLAGLEQ
DSYRWNEE
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