Gene Phep_2923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2923 
Symbol 
ID8254034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3486055 
End bp3486531 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content44% 
IMG OID644936571 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003093183 
Protein GI255532811 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.342216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000380368 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCATAA ATATAAGAGT AGCAGTAAAA GAAGATTGTG CCAGATTGCT GGAACTGGTA 
AATGAACTGG CCGTTTATGA AAAGGCACCG GAAGAAGTAA CCGTAACACT GGACGAATTT
ATTGATGCGG GTTTTGGCAA AACCAAGGTT TGGGACGCTT TTATAGCAGA AGAAGATGGC
TTTATTGCAG GGTTTGCCAT TTATTATACG CGGTATTCGA CCTGGAAAGG CCGCCGCCTG
TACCTGGAAG ATTTTATTGT AACAGAAGCC TACAGGGGCA AAGGGATCGG AAAACTGCTT
TTTGAAGCCG TCATTAAAGA GGCCGGAGAA AAGGGCTTTA AAGGCATGAG CTGGCAGGTG
CTGGACTGGA ACCAGCCGGC CATTAATTTT TACAATAAAT ACAATGCACA GCTTGAAGCA
GGTTGGTTAA ATGCCGCTTT TTCGACAGAA AAATTGGCCG AACTGCAAAA TACATGA
 
Protein sequence
MSINIRVAVK EDCARLLELV NELAVYEKAP EEVTVTLDEF IDAGFGKTKV WDAFIAEEDG 
FIAGFAIYYT RYSTWKGRRL YLEDFIVTEA YRGKGIGKLL FEAVIKEAGE KGFKGMSWQV
LDWNQPAINF YNKYNAQLEA GWLNAAFSTE KLAELQNT