| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2918 |
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| Symbol | |
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| ID | 8254029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3480474 |
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| End bp | 3481175 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936566 |
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| Product | 3-oxoacid CoA-transferase, A subunit |
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| Protein accession | YP_003093178 |
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| Protein GI | 255532806 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000077275 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCAATA AAGTTGTTTC AGGTGCTGAA GAAGCGATAA AAGACATCGA AGATGGCAGC
ACCCTGATGC TTGGTGGCTT TGGTTTATGC GGTATTCCCG AAAACTGTAT TGCTGCACTG
GTAAAAAAGG GGGTTAAAGG TTTAACCTGT ATTTCTAATA ATGCCGGTGT AGATGATTTT
GGAATAGGTT TAATGCTGCA GCAGCGCCAG GTAAAAAAGA TGATCTCTTC TTATGTAGGT
GAAAATGCAG AATTTGAACG TCAGCTGCTG AGTGCTGAGC TGGAAGTAGA GCTGATCCCT
CAGGGCACAC TGGCTACCCG ATGTATGGCT GCGGGTTATG GTATGCCGGC CATTTTTACT
CCGGCAGGGG TGGGTACAGA AGTAGCGGAA GGTAAAGAGA TCAGAAATTT TAAAGGTAAG
GATTACCTGA TGGAATATGC CTTTGAGGCA GATTTTGCTA TCGTAAAAGC CTGGAAAGGG
GATACTGCGG GAAACCTGAT CTACAGGTCG ACCAGCAGGA ACTTTAACCC GGTAATGGCC
ATGGCGGGTA AAGTTACCAT TGCCGAGGTG GAAGAGCTGG TGGAAGCTGG CGGGCTTGAT
CCCGACCAGG TACATACCCC AGGTGTATTT GTACACCGTA TTTTTCAGGG CCCGGCTTAT
GAAAAAAGAA TAGAACAACG TACAGTAAGG ACCAAAGGAT AA
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| Protein sequence | MINKVVSGAE EAIKDIEDGS TLMLGGFGLC GIPENCIAAL VKKGVKGLTC ISNNAGVDDF
GIGLMLQQRQ VKKMISSYVG ENAEFERQLL SAELEVELIP QGTLATRCMA AGYGMPAIFT
PAGVGTEVAE GKEIRNFKGK DYLMEYAFEA DFAIVKAWKG DTAGNLIYRS TSRNFNPVMA
MAGKVTIAEV EELVEAGGLD PDQVHTPGVF VHRIFQGPAY EKRIEQRTVR TKG
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