| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2915 |
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| Symbol | |
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| ID | 8254026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3477994 |
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| End bp | 3479175 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936563 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_003093175 |
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| Protein GI | 255532803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1388] FOG: LysM repeat |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.992614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000148718 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAAAT ATTATATAGT ATCCGTATTC GCCCTGCTTT TAAACCTGTC GACATTCTCG
GCAAGCGCCG AGAGCACCAG AGATTCGATA GGGGTAGAAA ACCACAATGG AAAAAAACTA
ATTGTACACC AGGTTGTTGC CAAGGACACC TATTACTCCA TAGCCAGGCG CTACAATGTA
TCCCCTAAAG ACATCATGAC CTATAACGAC AGCAAATTTT TACAAATTGG CGTCATCGTT
AAAGTACCTA CCAATGTTCC TTTTAACAGT ACCGTAACCC CTCCGGGTAA AACAGGTAAA
GCCCAGGTTA CAACACCTGC AGCTGCTGTT GCCACTGAAG GCGGGCTGAC GGAGCATATC
GTACAGAAAA AGGAAAACCT GAACATGCTG GCCGAGAAAT ACGGTACCAC AGTAAATGAG
ATTAAGCGGG TAAACAACCT GAATTCCATC AACCTGCAAA TTGGCCAGGT GCTCAAAATC
CCCGGAAAAC CAGCAGAACA GGAACCTGTT CAAACGGCCC AGGTACCAGT TGTACAACCC
AGAAAAGAAG AAACACCGGT AAAAACGTCT ATCCCTCCTG AAAACAGGTA TAAAAAACCG
GAGCAGCAGC CTGCAAAAAA AGAAGCCGCC CAGGAAAAGC CCGAAGAACT TGTGGTACAT
ACCGTAGCTT CTAACGAAAC CATTTATTCT ATTGCTACCA CCTATAAAAT GACTATGGAC
CAGCTAAAGG CCAAAAACAA CCTGACAGAC AATGCGCTGC ATGTTGGCCA GAAGCTGCTG
ATCAGGGGAC AATATCCGGT AAAAGGTGCT TATACGCCGG CCGAAAGCAG TGCAGATACG
CTGAAATCTA TAAAAGATCC GGCATTAAGG TATCCTGCAA GCCGGTACGG ATTGAACCAG
GTGGATGAAA AAGGAACAGG GATCTGGATT GCAGATGCAG ACCTTGACCC TTCAAAAATG
CTGGTGCTGC ACCGCACTGC CCCAATAGGT ACGGTGATGA AAATCACCAA TCCCATGACC
AACAGGTCTA CCTTCGCTAA AGTTGTTGGT AAATTCACAG AAAATGAATC GACAAAGGAT
GTGATCATTG TAATGACTAA AGCTGTTGCT GATGCACTGG GTGCTTTGGA CAAACGATTT
TATTGCAATT TAACCTACGG CGGACAAGAC AATGAACAAT AA
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| Protein sequence | MHKYYIVSVF ALLLNLSTFS ASAESTRDSI GVENHNGKKL IVHQVVAKDT YYSIARRYNV
SPKDIMTYND SKFLQIGVIV KVPTNVPFNS TVTPPGKTGK AQVTTPAAAV ATEGGLTEHI
VQKKENLNML AEKYGTTVNE IKRVNNLNSI NLQIGQVLKI PGKPAEQEPV QTAQVPVVQP
RKEETPVKTS IPPENRYKKP EQQPAKKEAA QEKPEELVVH TVASNETIYS IATTYKMTMD
QLKAKNNLTD NALHVGQKLL IRGQYPVKGA YTPAESSADT LKSIKDPALR YPASRYGLNQ
VDEKGTGIWI ADADLDPSKM LVLHRTAPIG TVMKITNPMT NRSTFAKVVG KFTENESTKD
VIIVMTKAVA DALGALDKRF YCNLTYGGQD NEQ
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