Gene Phep_2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2907 
Symbol 
ID8254018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3468610 
End bp3469479 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID644936555 
Producthypothetical protein 
Protein accessionYP_003093167 
Protein GI255532795 
COG category 
COG ID 
TIGRFAM ID[TIGR02757] conserved hypothetical protein TIGR02757 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000398254 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGAATTTT TAGAACTTAA AGATTTTTTG GACATGAAGG TGGCGCAGTA CAACCGCCCT 
AACTTTATTC AAAACGATCC GATCTGCATT CCGCACCAGT TCACTAAAAA ACAGGATATA
GAAATTGCCG CATTTTTTGC GGCAATTTTG GCTTGGGGAC AGCGCAAAAC CATCATCAAT
AAATGCAATG AACTCTTTGC AAGAATGGAC CATGCGCCTT ACGACTTTAT GCGCCATCAT
GGCAATGCTG ATCTGAAAGG GCTTCTGGGC TTTAAGCACC GGACTTTTAA CGATACCGAC
CTGCTGTATT TTGTGTCCTT CTTTAACCAG CACTATCAGC AATCGGATAG CCTGGAAACC
GCCTTTCTAT CGCCTGCAGA TGAGTTCAGG ACGGAATATA CAGCAGATAT GACATCAGGA
ACAGTACCCC TGGTTAGCGG CAGTGCTTCT GCAGCCTGCC TGCTGCCGGA ATTGAGCAGT
GCTGTGCCGC GAATAGAAAA ATCACTCAAT TATTTCCGTT CTTATTTTTT CTCTTTGGCA
GATTACCCGC GCAGAACGAT CAAGCATGTG TCTTCCCCTT TGCAGAAATC TACCTGCAAG
CGGCTGAATA TGTTTCTGAG ATGGATGGTG CGTCAGGATC ATAAGGGGGT TGATTTTGGG
ATATGGAACC GGTTGAAACC TGCCGACCTG ATCTGCCCCT GTGATGTGCA TGTAGACAGG
GTGGCGCGGA AGCTTGGACT TATTGAACGT AAACAGACAG ATTGGAAAAC GGCAGTGGAG
CTGACGGCAC GCCTGCTGGA GTTTGATCCT TCAGACCCGG TTAAGTATGA TTTTGCTTTG
TTTGGCTTAG GGGTTGAAGA GAAGTTTTAA
 
Protein sequence
MEFLELKDFL DMKVAQYNRP NFIQNDPICI PHQFTKKQDI EIAAFFAAIL AWGQRKTIIN 
KCNELFARMD HAPYDFMRHH GNADLKGLLG FKHRTFNDTD LLYFVSFFNQ HYQQSDSLET
AFLSPADEFR TEYTADMTSG TVPLVSGSAS AACLLPELSS AVPRIEKSLN YFRSYFFSLA
DYPRRTIKHV SSPLQKSTCK RLNMFLRWMV RQDHKGVDFG IWNRLKPADL ICPCDVHVDR
VARKLGLIER KQTDWKTAVE LTARLLEFDP SDPVKYDFAL FGLGVEEKF