| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2905 |
|---|
| Symbol | |
|---|
| ID | 8254016 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3467328 |
|---|
| End bp | 3468059 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644936553 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003093165 |
|---|
| Protein GI | 255532793 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000459225 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGACA GCCTGGTTAT TATTCCCACT TTCAACGAAA AAGAAAACAT CGAGAAGATC
ATCAGAAAGG TTTTTTCATT GAATTACTTT TTTGAGATCT TAATTATCGA CGATGGTTCT
CCCGATGGTA CGGCTGATAT TGTAAAAAAA CTACAGCTGG AATATCCTGC ACTTCACCTG
GAACAGCGTA CCGGAAAGTT GGGGCTGGGC ACAGCCTATA TCCATGGTTT TAAATGGGCT
TTGGCGCGGC CGCAATATGC CTATATTTTT GAAATGGACG CTGATTTTTC GCATAGCCCG
GAAGACCTGG TCCGTTTAAG AAATGCTTGT GTAAATGGGG CTGATGTGGC CATAGGCTCC
CGCTATATCA ACGGTGTTAA CGTAGTGAAC TGGCCAATGA GCAGGGTACT GATGTCGTAT
TTTGCTTCTA TGTATGTCCG GATGATCACC CGTATCAACA TACAGGATGC CACTGCGGGC
TTTAAATGCT ATACGCGTAA AGTTCTGGCT ACCATACCAT TGGACAAAAT CAGGTTTGTA
GGCTATGCCT TTCAGATAGA GATGAAATTT ACTGCTTTAA AATATGGTTT TAAAGTAGTA
GAGGTTCCTA TCATCTTTAC TGACCGTACC GAGGGGGTCT CAAAAATGAG TACCAGGATA
TTCAGGGAAG CATTTTTGGG GGTGATCCAG ATGAAGGTCT CGAGCTGGTT CAGAAAGTAC
GACCGCTCCT GA
|
|---|
| Protein sequence | MSDSLVIIPT FNEKENIEKI IRKVFSLNYF FEILIIDDGS PDGTADIVKK LQLEYPALHL
EQRTGKLGLG TAYIHGFKWA LARPQYAYIF EMDADFSHSP EDLVRLRNAC VNGADVAIGS
RYINGVNVVN WPMSRVLMSY FASMYVRMIT RINIQDATAG FKCYTRKVLA TIPLDKIRFV
GYAFQIEMKF TALKYGFKVV EVPIIFTDRT EGVSKMSTRI FREAFLGVIQ MKVSSWFRKY
DRS
|
|---|
| |