Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2904 |
Symbol | |
ID | 8254015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3465739 |
End bp | 3467232 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936552 |
Product | amino acid/peptide transporter |
Protein accession | YP_003093164 |
Protein GI | 255532792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00155043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGAAC AATTGACATT AGAAGAAATC CAGGATTTTA AGGGCAAATA CCCTAAACAA CTCTGGGCGC TGTTCCTTGT AGAAATGTGG GAACGTTTCT GCTTTTACGG GATGCGGGGA ATGCTGGTCA TATTTATGAT CGACAAGGTG CTTGGCCTGG CACTTACAGA CAAGAGTGCC AACCTGCAAT ATGCGGCCAT ACAGGCCTTT GTGTATACCT TTACCTTTCT GGGTGGTATT TTTGCCGACA AAGTGCTTGG CTTCAGAAAA TCACTGTTCT TTGGTGGAAT GGTGATGGTG CTTGGCAACC TGATCATCGC CACATCGCCT AAAGAGCTTT TCTATATCGG CATTACGCTT TCCATTATCG GGACCGGCTT TTTTAAGCCC AATGTTTCTT CAATGGTAGG CGAATTGTAT AAAGATGGTG ATGGCCGCAG GGATGCCGGT TATGGTTTGT TCTATGCTGG CATAAATGTA GGCGGTTTAC TGGGTGGTGC TTTATGTGTA TACCTGGGTA AGTACGTTTC CTGGAATTAT GCTTTCCTGG CAGCGGCCGT TGTCATGGCG CTGGGACTGG TTACCTTTAT TTTTACCCAG AAAACCCTGG GCCCTATCGG TGATTCTCCT TTAAAGCATA TGCCGCTAAA TAAAAGAAGG ATGCGTGAAA TCGGTGTTTA CCTTCTTTCG CTGATCTCTA TACCACTGAT CCTGATCATG GTGCAAAACA CCAGGTACAC GGATTATTTC ATGTATACCA TTGCACCTGT TGCGATTATT TATTTTTTGT ACGAAACCTA TACGGTTAAA GACCATAAGT TCAGGCTAAA ACTCTTTGCA GCCTTTATAT TTATCTTCTT TTACTTTCTG TTCAATGCCA TTTTTGAGCA AAGTGGTGGT TCTTTATCGC TTTTTGCGGC CGAGAATTTA AACCATAGCC TCCTTTTCTT TAACATCGAC CCCAATGTGG TCAACAACAG CTCCAATTCT TTTTTTGTGA TCCTGTTTAG TCCTTTAATT GGTTTGTTAT GGTTATGGCT GGCCAAAAAG AAGATAGAGC CCAACTCGAT CATCAAATTT GGTATTGGCT TTCTGTTTCT GGGTGCTTCT TTCTATATTT TCTTTTATAC CCGTTTCTTT GCCGATTCAA ATGGCATAAC TTCCTTAAAC CTGTTTACTT TTGGTTACCT GGTAACCACA CTGGGCGAGC TGTGTTTAGG GCCTATCGGC ATGTCGCTGG TTACCCAGCT TTCACCCAAG CGCTTAACAG GGATGATGAT GGGCATGTGG TTCCTGGCCA GTGCATTCGG ACAGTTTGCT GCTGGTAAAC TGGGTGCCGA TATGTCGGTA AGTGACGAGC ATGCCTCTTT GGTTACCAAA CTGCAATCGT ACACGGATGG ATACTACCAG CTGGCCATTT ATGCTGCTGT TGCCGGTGTA TTTTTAATTG TATTCTCACC TTTGATCAAA AAACTGATGC AGGGCGTCAG TTAA
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Protein sequence | MAEQLTLEEI QDFKGKYPKQ LWALFLVEMW ERFCFYGMRG MLVIFMIDKV LGLALTDKSA NLQYAAIQAF VYTFTFLGGI FADKVLGFRK SLFFGGMVMV LGNLIIATSP KELFYIGITL SIIGTGFFKP NVSSMVGELY KDGDGRRDAG YGLFYAGINV GGLLGGALCV YLGKYVSWNY AFLAAAVVMA LGLVTFIFTQ KTLGPIGDSP LKHMPLNKRR MREIGVYLLS LISIPLILIM VQNTRYTDYF MYTIAPVAII YFLYETYTVK DHKFRLKLFA AFIFIFFYFL FNAIFEQSGG SLSLFAAENL NHSLLFFNID PNVVNNSSNS FFVILFSPLI GLLWLWLAKK KIEPNSIIKF GIGFLFLGAS FYIFFYTRFF ADSNGITSLN LFTFGYLVTT LGELCLGPIG MSLVTQLSPK RLTGMMMGMW FLASAFGQFA AGKLGADMSV SDEHASLVTK LQSYTDGYYQ LAIYAAVAGV FLIVFSPLIK KLMQGVS
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