| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2892 |
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| Symbol | |
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| ID | 8254002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3448821 |
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| End bp | 3450695 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936539 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093152 |
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| Protein GI | 255532780 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA GATTCACTAC AAAATATACC ATACTGGCCA TTTCATTAAT GTTGCTGGTT
GCACCTGGAT GTAAAAACTC TTTTCTCGAT GAAACGCCGG TTTCTACACT CACAACAGAT
GTTTATTACA AAACAGAAGC GGGCTTTGAG GACCTGGTGA GGTCATGCTA CCCTTTGCTG
CGGAATATCC ATCAAACCCG GAGCCTGGTT TTACTGGGCA CTGACCTTTT TAGTCCGGGT
GCTTACAATG ACCCGAAATT TGCAACTACA ACGCCCAATG CAGGCTCGTT AAACCAGTAC
GACGCAGGCC TGAATTCTTC TCTGGATGAT TTCAGGGTGC TGTGGACGCT GTTGTACACA
GAACTTGGCC GGGTAAATAC GGCAATCAGC AGGGCAGATG GCGTTACAGG CATGAATGAG
ACCTTAAAAA GTACCCGTGT ATCCGAAGCT AAATTTTTAA GGGCCCTGGT GCTCTTTTAC
CTGGTGCAGC AATGGGGCGA TGTACCGATG CCCTTAACAG AAACACAAAG TGCAAGTAAA
GTAGCAACAA GGATCGCTTC GGCAGAGGTA TATAAACAGA TTCTGGCTGA TCTGCTGGAT
GCAGAATCAA AGCTTCCTCC GGTGGCATCC AATTACGGAC GCATCACAAA AGGCGCTGCG
CAGTTCCTGC TGGCCCGCGT ATATTTAACC CGTGGCTGGA ATTTTAAAAA TACACTTGGC
GGTTCCAATG CCGATTTTAC GTCGGCACTG CAATATGCCG ACAAGATCAT TGCGGCCTAT
CCACTGGCGG CAAATTATAA AGATTTGTTT CCGGTGCGGT CCAAAAACCC ACTTGCCCAA
TACACCGGTG CCCAGAATGA TAAAAACGCG GAGATTGTTT TTTCGGTACA GTATAACCCT
GATGTGCTGA CCAATAAAAC CGATCCGGCT TTTGCTGTAG ATGCTGCCGG AGGTAATAAC
CTGCATTCTG TTTTTGGTGG TACGGCTGAA AGTTTTCCTG GTACTAAAGG CAGAACAAGT
GATTACAACC GCTCACAGCC TATTTACCCG CTGGCAGCGG CTACTTACAG GTTTTATGAC
CCTCAAAATG ACAGCCGTTA CGACCATAAT TTTTTAGAAG TAGGTTATGC CTTACTGGCT
GTTACAGGGT TTAAGCCATT ACCCTTGTTA GATCCCAACC TTAAGATCAA TATTAAAAGT
GGTGACACGG TGGTGTACTA CCGTCCATGG AATAATCCTG CAACTGCACT TAAAGACAGA
GGTGTAGATG TTGGTGGCAC CCGAAACTAT TCGGTGATTA ACGGAAGCGA ATGGGGAGGG
GGCTATAATA TTGTAAATGG TGTGGCTGCA AGTGGTTTTC CGTCGGGAGA ACCCATTATG
TGGAAGTTCT GGCAGCCAAA TATTCCTTAT GGCGATGCAT ACGGAACTTT CAATGAATCT
ATTTTCCGCT CTGCCGAAGC TTATTTAATT GCTGCAGAGG CAATTGTTAA AGGCGCTACA
GGCGGTCAGT TGGGTACTGC CGATGTGTAT TATAATAAAG TGCTTAACCG GGCCCTGGGT
GCTAAAGTTG CTGCGGATCC AAAATGCGCT AAATTCCCTG GCGATATCAG ATCTCTGGAA
ACCGTTTCTT ACCGGGCTAC ACCGGCCAAT ATCTCCATCG ACCTTATTCT GGATGAAAGG
GCCCGTGAAT TGCTTGGCGA ATATGACCGC TGGTTCGATT TAAAAAGAAC AGGAAAATTG
ATTGAGCGGG TGTTGAAATA CAATCCATGG GCGATAAAGA GCAATACGAT CAAGGACACG
CATTATTTGC GGCCAATCCC CCAAAGTGAG ATTGATCTGT CGTTCCCGGC GATGTCTCAG
AATCTGGGTT ATTAA
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| Protein sequence | MKSRFTTKYT ILAISLMLLV APGCKNSFLD ETPVSTLTTD VYYKTEAGFE DLVRSCYPLL
RNIHQTRSLV LLGTDLFSPG AYNDPKFATT TPNAGSLNQY DAGLNSSLDD FRVLWTLLYT
ELGRVNTAIS RADGVTGMNE TLKSTRVSEA KFLRALVLFY LVQQWGDVPM PLTETQSASK
VATRIASAEV YKQILADLLD AESKLPPVAS NYGRITKGAA QFLLARVYLT RGWNFKNTLG
GSNADFTSAL QYADKIIAAY PLAANYKDLF PVRSKNPLAQ YTGAQNDKNA EIVFSVQYNP
DVLTNKTDPA FAVDAAGGNN LHSVFGGTAE SFPGTKGRTS DYNRSQPIYP LAAATYRFYD
PQNDSRYDHN FLEVGYALLA VTGFKPLPLL DPNLKINIKS GDTVVYYRPW NNPATALKDR
GVDVGGTRNY SVINGSEWGG GYNIVNGVAA SGFPSGEPIM WKFWQPNIPY GDAYGTFNES
IFRSAEAYLI AAEAIVKGAT GGQLGTADVY YNKVLNRALG AKVAADPKCA KFPGDIRSLE
TVSYRATPAN ISIDLILDER ARELLGEYDR WFDLKRTGKL IERVLKYNPW AIKSNTIKDT
HYLRPIPQSE IDLSFPAMSQ NLGY
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