| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2887 |
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| Symbol | |
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| ID | 8253997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3438901 |
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| End bp | 3440877 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936534 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003093147 |
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| Protein GI | 255532775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00523951 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACCA CGCTGGTTTA CGGACAAAAA AACAATACCA TCTGGATGGA TGATTTAAGT
ATCCGTACTT TTTCGGAAGG GATTCCGGCA GTGCTGGCAA AGACTTCAGG TTCCGGTGAG
GCGATCCGTA TGAAAGGCAT CACTTACAGC AGAGGGATTG GTGTGAATGG TACCAGTGTG
CTGAGTTTTT TACTGAATGG AAACGCCTCA GCATTTTCAG CGGTGGTGGG TGTAGATGAT
ATGGGGATGA AAGGTTTGCC GTATCGGTTT TATGTGATCG GTGACCGGAA AATTCTTTTT
GAAAGCGGAG ATATGAAATG GGGAGATCAA CCCAGAATGT TAAATGTAAA TTTAACAGGA
ATTAAGCGTT TGGGCTTGCT GGTGCTTGTT GAGCAGGGTA TAACCAAAAC CTACTCCAAT
TGGGCTGATG CTAAATTTAT CATGAAAGAT GAGCAGATGC CACTCAACAT TCCCAATACA
GATGAACGGA TTATTTTAAC CCCTGTTGCC GGAACTCAAC CTAAGATCAA TTCTGCGGCT
GTGTTTGGTG CCAGACCGGG GAATCCATTT TTGTATACCA TTGCTGCAAC CGGCGAAAGG
CCCCTGGTAT TTTCAGCCAG CAATTTGCCG GACGGGCTGC AGGTTGATGC GAAGACAGGT
ATCATTACAG GTAAGGTGTT AGAGAGAGGG GTGTATACCG TAACATTGAA AGCTAAAAAT
TCATCCGGTG AGTCTGTTAA ACAGCTGAGG ATAAAAATTG GCGATACCAT TGCATTGACA
CCACCTATGG GCTGGAATGG GTGGAACTCC TGGGCAAGAG CAATTGACCA GGAAAAAGTA
ATGGCATCAG CAGATGCCAT GGTAAAAATG GGACTGGCCA ATCATGGCTG GACTTACATC
AATATCGATG ATGCCTGGCA GGGGCAAAGA GGTGGAAAAT ACAATGCCAT TCAGCCCAAT
GAAAAGTTTC CTTCTTTTAA ACAAATGACA GATTATATCC ATAGCCTGGG CTTAAAACTC
GGTGTTTATT CCACTCCCTG GATCAGCAGT TACGCGGGTT ATCCTGGTGG TTCTTCCAAC
CTGGAGCATG GATTTTTCCC TGATGCTGTG CGGGACAATA AAAGAGCTTT CCGCTATATC
GGCAAGTACA GTTTCGAAAA AGAAGATGCC ATGCAAATGG CGGAATGGGG AGTTGATTAT
TTAAAATATG ACTGGCGGAT AGAAGTACCT TCGGCAGAAC GCATGTCGGT AGCCCTGAAA
AATTCGGGCA GAGACATCTT TTACAGCATT TCCAATTCGG CTCCTTTCAG CAACGTAAAA
GACTGGGTAC GGTTAACCAA TAGTTACCGT ACAGGACCGG ATATCAGGGA TAGCTGGTTA
AGCCTCTACG TAAGTGCATT TACACTCGAT AAATGGAGCC CTTATGGCGG ACCGGGGCAT
TGGAATGATC CGGACATGAT GATATTGGGC AATGTGACTA CCGGTTCTCC TTTACATCCA
ACCAGGCTTA CTCCGGATGA ACAGTATAGC CATGTGAGTT TATTCAGTTT ACTGGCCGCC
CCGCTGCTGA TTGGCTGCCC TATAGAACAA CTGGATGCCT TTACGCTAAA CCTGCTGACC
AATGATGAAG TGATTGCTGT AAACCAGGAC GCGCTGGGCA GGCCTGCAAG GTTGGTTGGA
GAAGAAAACG GTGTGCAGAT CTGGTTGAAA CAACTGGAAA ATAAGGAGTA TGCGATTGGC
CTGTTTAACA TCGACGGATA TACCAAAACG CCGCAGTCTT ATTTTCGCTG GGGTGATGAA
AAGCCTGTAT CCTTTACCCT GGATCTGACA AAAATCGGAT TGAAGGGAAA ATATACCATA
CGTGATGTAT GGAGGCAAAA GAACCTAGGT GAATTTGAAG GAACATTTAA CACCGGCATC
AGGCACCATG GCGTGGTAAT GATCAGGTTA ACGGCCCATC AATCAACAAA ACATTAA
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| Protein sequence | MGTTLVYGQK NNTIWMDDLS IRTFSEGIPA VLAKTSGSGE AIRMKGITYS RGIGVNGTSV
LSFLLNGNAS AFSAVVGVDD MGMKGLPYRF YVIGDRKILF ESGDMKWGDQ PRMLNVNLTG
IKRLGLLVLV EQGITKTYSN WADAKFIMKD EQMPLNIPNT DERIILTPVA GTQPKINSAA
VFGARPGNPF LYTIAATGER PLVFSASNLP DGLQVDAKTG IITGKVLERG VYTVTLKAKN
SSGESVKQLR IKIGDTIALT PPMGWNGWNS WARAIDQEKV MASADAMVKM GLANHGWTYI
NIDDAWQGQR GGKYNAIQPN EKFPSFKQMT DYIHSLGLKL GVYSTPWISS YAGYPGGSSN
LEHGFFPDAV RDNKRAFRYI GKYSFEKEDA MQMAEWGVDY LKYDWRIEVP SAERMSVALK
NSGRDIFYSI SNSAPFSNVK DWVRLTNSYR TGPDIRDSWL SLYVSAFTLD KWSPYGGPGH
WNDPDMMILG NVTTGSPLHP TRLTPDEQYS HVSLFSLLAA PLLIGCPIEQ LDAFTLNLLT
NDEVIAVNQD ALGRPARLVG EENGVQIWLK QLENKEYAIG LFNIDGYTKT PQSYFRWGDE
KPVSFTLDLT KIGLKGKYTI RDVWRQKNLG EFEGTFNTGI RHHGVVMIRL TAHQSTKH
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