Gene Phep_2886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2886 
Symbol 
ID8253996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3436702 
End bp3438894 
Gene Length2193 bp 
Protein Length730 aa 
Translation table11 
GC content46% 
IMG OID644936533 
Producthypothetical protein 
Protein accessionYP_003093146 
Protein GI255532774 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.179721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA TCAAAAAAAT AGTTCAGCTA AAGATATATG GGGCAGCGCT GTTGCTGCTG 
ATCTTTCTAA GCATCAGTTT TTCATCGCAA GCCCAGCCAA AACAGGATAT CTATGTGCAG
GTTGATGCAA AAACAGGAAA TTATTCGGTC AGCTCATCCA GTCTCAAATG GACCATGAGT
GGCAGCATAG GGAAGGCCCT CAATCGTTTA AAAAAAGAAA AGGGAAAAGA CGTTATTGGA
ACATATACCG ATATCTCTTT TCAGTGGGAA GGCAACAATC TGTATAAGGG TAGTATCCGC
TGGTATGCCG GATGCCCGGT CGTGTTGTTT TCTTTAACCA CCCCAAAGGG AGCAGATGGT
CAGTCTACGG AGGCCTTTCC TGATTTTACC CGCATGCCAG ACTCTTTGTA CCACTACAGT
TATCATAACC GGATATTTCC ACTGGCACAG TATTTTTTAG AGGAAACATC TACCCCCTGG
TTGTTCTTCA ATGGTAAAAA CGACGCCGCC ATTTTATCGC CTGCATCGGA TTTTATGGTG
TCGCTCATGA CAGGTGACGG TACTACCCAC GTGAGGAGTG GCCTTAATCC GGAAGTACAA
AAGCTTCCCG CAGGTTTTAC CCATTCTTCT ATCCTGGTGA TGCGCAAGGG TATACGCAAT
ACCTGGGACG AATGGGGTGC CGCATTGCGT AAAACCTATC ACAGAAAAAT TCCGGCAAAT
GATGCCGATG TAGTGCTCAA ATACTTTGGC TGCTGGACCG ATGTAGGCGG TGATTATTAT
TACAATTACG ATCCGGCAAA AGGTTATGAT GGTACCCTGC TGGCCCTTAA AGAACATTAT
AAAAAAGAGG GCATTCCATT GGGCTATATG CAGCTGGATA GCTGGTGGTA CCAGAAGTCC
ACTACGAGTG TACACAATGT ACCTGGTGGC ACAAAAAAGA AAGCGGAATT TCCTGAAGGC
CCCTGGAACC GGTCGGGCGG TTTAATGGAA TACAAAGCCG ACACCGCTTT GTTCCCGAAC
GGGCTTGCTG CTTTTCAGCA GCAGCTGGGA CTGCCACTGG TAACGCATAA CCGCTGGATT
GATCGTGCCA GTCCTTACCA CAAACGGTTT AAGATCAGTG GTATCGGAGC GATTGATCCG
GCTTTCTGGA AAGAAATTAT GGGCTATCTG AAAAGTTCGG GAGTAGCGGT ATACGAGCAG
GACTGGATCA ATTACATCTA TACCAATAAT CCGGAAATGA AATCGGACAT CAATGTGGCC
AATGCTTTTA CAGATCATAT GGCAAAGGCG GCGCAGGATG CGGGCATCAA CCTGCAATAT
TGCATGGGCT TGCCCAGGTA TTTTATGCAA GGTGTAAAAT ACAATAACCT GACTACCATC
AGGACAGCGG GAGATCGCTT TATGCCCAAA AGATGGATGT ACTTTTTATT TACTGCACAG
CTGGCTTATG AAATGGGCAT CTGGCCCTGG AGTGATGTTT TTAAAAGTTC TGAAATCGAC
AATATGATTG TATCTGTGCT ATCGGCAGGT CCGGTAGGCA CCGGTGACCT GATTGGTACA
GAAAGCAAGA AAAATATCCT GATGGCCTGC CGTGCCGATG GTGTGCTGGT TAAGCCGGAC
GAACCGTTAT TGCCGCTGGA CCAGAATTAC GTGCAAATGG CCCGTAAGGA AGAAAAACCT
ATAATAGCAG CCACGCACAC GCTACATGGT AACATAAAAA CAGGCTATGT TTTTGCATTT
GGAAACGATA CCACTAAGAT CAACCAGTTC AGTTTTGGTT TATCTGAACT GTCGATGAAA
GGCCGATCGG TCGTATTTAA TCCACAAAAA CATACGGTAC AAGTGCTGGA GGCAGGAAAA
AGATTTAGTG CAGACTTGCC GGAAGAAAAG TATGCCTTTT ACATTGTGGC ACCCATCACC
GCTTCAGGAA TTGCCTTTCT GGGAGATGCC GGAAAAATAA CGGCTACAGG AAAAAAACGC
ATTGCCGGTA TCATCGATGC CGGAAAAAAA CTGCAGGTAA AAGTATTGTT TGCCAAAGGG
GAACCAGCGG TAACCTTACA GGGCTATTCC CTGCAGCGCA TAAAATCCAG CAAAGGGAAA
CTGAGCCAGG ATGCAGCTAC CCATTTATTT ACCGTAGTTG TGCCACGGCC CGCAAAAGGT
GATGTAGAAA ATTTAACACT TCAAACAAAC TAA
 
Protein sequence
MQFIKKIVQL KIYGAALLLL IFLSISFSSQ AQPKQDIYVQ VDAKTGNYSV SSSSLKWTMS 
GSIGKALNRL KKEKGKDVIG TYTDISFQWE GNNLYKGSIR WYAGCPVVLF SLTTPKGADG
QSTEAFPDFT RMPDSLYHYS YHNRIFPLAQ YFLEETSTPW LFFNGKNDAA ILSPASDFMV
SLMTGDGTTH VRSGLNPEVQ KLPAGFTHSS ILVMRKGIRN TWDEWGAALR KTYHRKIPAN
DADVVLKYFG CWTDVGGDYY YNYDPAKGYD GTLLALKEHY KKEGIPLGYM QLDSWWYQKS
TTSVHNVPGG TKKKAEFPEG PWNRSGGLME YKADTALFPN GLAAFQQQLG LPLVTHNRWI
DRASPYHKRF KISGIGAIDP AFWKEIMGYL KSSGVAVYEQ DWINYIYTNN PEMKSDINVA
NAFTDHMAKA AQDAGINLQY CMGLPRYFMQ GVKYNNLTTI RTAGDRFMPK RWMYFLFTAQ
LAYEMGIWPW SDVFKSSEID NMIVSVLSAG PVGTGDLIGT ESKKNILMAC RADGVLVKPD
EPLLPLDQNY VQMARKEEKP IIAATHTLHG NIKTGYVFAF GNDTTKINQF SFGLSELSMK
GRSVVFNPQK HTVQVLEAGK RFSADLPEEK YAFYIVAPIT ASGIAFLGDA GKITATGKKR
IAGIIDAGKK LQVKVLFAKG EPAVTLQGYS LQRIKSSKGK LSQDAATHLF TVVVPRPAKG
DVENLTLQTN