| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2885 |
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| Symbol | |
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| ID | 8253995 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3434667 |
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| End bp | 3436700 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936532 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003093145 |
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| Protein GI | 255532773 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.14976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT TCATATCCGG GTGTTTTACA CTTTTATTAA CCTTTTCATT TTTAGTAAGT
TTTGCGCAGA AAAACCATGT AGTATGGCTG GATGACCTTC CTATCCAAAG TTTTTCAGAC
GGCATCCGTC CGGTGGAGGT AAAAGCCAAC TATGGTAAGG ATACCATGTG TGTAAAGGGT
GTTAAGTATT TAAGGGGATT GGGGGCACAA AGCATCAGTA TCCTTAAATT TGACCTTTCT
AAACAGGCCA TACGTTTTTC GGCAATGGCG GCAGTGGATG ACCATGGTAA TAAGGATATA
GCGCTGCGGT TTTATGTATT GGGCGACGGT AAAATATTGT TTGAAAGCGG GGAAAGGAGG
GTTGGAGATG AGCCGCTGAA AGTAGAGGTA GATTTGAGCG GAATTAAACA ACTTGGACTA
CTGGTTACGG ATAAGGTAGG TGGTGTTGGT AATAAAAGGA CCTATGCCAA CTGGATCAAT
GCCAAACTGG AAATGAAAGA GGGGCATTTG CCCGGATACC TGCGGTATCC AGATCAGAAA
TATATACTGA CCCCGCTACC CAAACAAACA CCTAAAATAA ATTCGGCCAA AGTATTTGGG
GCAAGTCCGG GCAATCCTGT CTTATACACA ATAGCAGCAA CGGGCAGGCG GCCTATGCAA
TTTTCGGCGC CTGGTTTACC CAAAGGATTA TCCATATCTG CATCAACCGG CATCATTACC
GGGGTAGTTA AAGAAAAAGG AAACTACAGT GTACTGCTGA AGGCTAAAAA TAACCTCGGT
GAAGCGAAGC AAAAATTAGT GATCAAAATT GGGGATACCA TTGCATTGAC ACCCCCACTG
GGTTGGAATG GATGGAATTC TTGGGAAACT AAAATTGACC GGGAAAAAGT AATGGCTTCT
GCCCAGGCCA TGGTAAATAA AGGTTTACGC GACCATGGCT GGAACTATAT CAATATTGAT
GACAGCTGGC AGGGCGTAAG AACCAGGCCA GACACCGCCT TACAACCGAA TGAGAAGTTT
CCCGACTTTA AAAGTATGGT TGATGCGATA CATGCATTGG GTTTAAAAGC TGGTTTGTAT
TCTACACCTT ATGTTTCCAG TTATGGCGGG TATGTAGGTG GCTCCTCTGA TTTTCCGGCA
GGAGGGGAAA CACATGAGCG CATTAAAGTG AACAGGCAAT CTTTTATGCA CATCGGAAAA
TACAGGTTTG AAACAATAGA CGCCAGACAA ATGGCGAGCT GGGGCTTTGA CTTTTTAAAA
TACGACTGGC GGATAGATGT AAATTCTACG GAACGTATGG CCGATGCCCT GAAAAAATCA
GACCGTGATG TGGTATTCAG TTTATCCAAC AATTCACCTT TTGAAAAAGT GAAAGACTGG
ATGCGCCTTT CACATATGTA CCGAACCGGC CCTGATATTA AAGATAGCTG GAATAGTTTG
TACACTACGG TATTCTCGAT CGATAAATGG GCAGCCTATA CTGGTCCCGG ACATTGGGCC
GATCCGGATA TGATGATTGT TGGTGATGTT GCAATTGGTC CGGTAATGCA TCCTACAAAA
TTAACAGCAG ATGAACAGTA TAGCCATGTT AGCATATTCA GTTTGCTGGC CGCACCCATG
TTGATCGGCT GCCCTATTGA GAAGCTGGAT GCATTTACAC TAAACCTGCT GACCAATGAT
GAAGTGATTG CCATTAACCA GGATCCACTT GGGAAAGCTG GCCGGCTTTT ATTGCGTGAG
GCCGGCATAG AGGTTTGGGT AAAACAACTG GAAGACGGTG CTTATGGTAT AGGTATTTTC
AACACTGCCG GGTATGGAGA AACACCCCAG TCTTATTTTC GCTGGGGCGA TGAAAAAGAA
AAACTATATG CACTGGATTT TACTAAGATA GGCCTGAAAG GAAAATGGCA GATCAGAGAT
GTGTGGCGGC AAAAATCCCT GGGGCAATAT AGTGGACCAT TCACCACTAC TGTTCCTTAT
CACGGTGTGG TGATGCTTAA AGTTTCTCCG GTTGGATTGG CTTTATTGAA ATAA
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| Protein sequence | MNKFISGCFT LLLTFSFLVS FAQKNHVVWL DDLPIQSFSD GIRPVEVKAN YGKDTMCVKG
VKYLRGLGAQ SISILKFDLS KQAIRFSAMA AVDDHGNKDI ALRFYVLGDG KILFESGERR
VGDEPLKVEV DLSGIKQLGL LVTDKVGGVG NKRTYANWIN AKLEMKEGHL PGYLRYPDQK
YILTPLPKQT PKINSAKVFG ASPGNPVLYT IAATGRRPMQ FSAPGLPKGL SISASTGIIT
GVVKEKGNYS VLLKAKNNLG EAKQKLVIKI GDTIALTPPL GWNGWNSWET KIDREKVMAS
AQAMVNKGLR DHGWNYINID DSWQGVRTRP DTALQPNEKF PDFKSMVDAI HALGLKAGLY
STPYVSSYGG YVGGSSDFPA GGETHERIKV NRQSFMHIGK YRFETIDARQ MASWGFDFLK
YDWRIDVNST ERMADALKKS DRDVVFSLSN NSPFEKVKDW MRLSHMYRTG PDIKDSWNSL
YTTVFSIDKW AAYTGPGHWA DPDMMIVGDV AIGPVMHPTK LTADEQYSHV SIFSLLAAPM
LIGCPIEKLD AFTLNLLTND EVIAINQDPL GKAGRLLLRE AGIEVWVKQL EDGAYGIGIF
NTAGYGETPQ SYFRWGDEKE KLYALDFTKI GLKGKWQIRD VWRQKSLGQY SGPFTTTVPY
HGVVMLKVSP VGLALLK
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