| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2882 |
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| Symbol | |
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| ID | 8253992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3430068 |
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| End bp | 3431246 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936529 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003093142 |
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| Protein GI | 255532770 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT TAAATTATTT TTCGATGAAA CATGCTGTTT GTTTATGGGT CGTATCCATT
TTTGGTATAG CATCCACTCC TGTTTTTTCC CAGTCCTGGG TTGATGCGGT AGACCGTCAT
GGCCGTGAGA TGTATATGCC GGCTGCCCAA TACAAATGGG ACTGGGGACA GGCAACTTTT
TTGAATGCGC TGGTCCAGTT GTATAAGGCC TCAGGTGAGG TGCAGAAAAA AACATACCTC
AATTATATTA AACAGGCTAT GGATGCCAGT TTTAATGTGG CAAATGGTAA GCACCCAAAT
GCAGTAGCTT CGGCGCATGG CATGGCTTTT CTTGCCAGGA TAACAGGTGA AAAAAAATAC
CTCGATAAAT GCAATGAGAT TTATGCCGAC TATTTGAAAA TTCCGCGTGC CCCGAATGGT
GGCGTTTCTC ATCGGGCAGA AACGGTGGAG TTATGGGACG ATACCGTATA CATGCTGAAT
ATGTTTTTGC TGGAAATGTA CCGGTTAACC GGTGATGAGA AATATATTGC TGATTTTGTG
GAGCAATTTA AAGCACATCA GGAAAAGCTG ATTGATGCGA AATCCGGTCT GTGGGTACAT
GGTTGGGATG CAGACCAGGC TGATTACAAT GATGGATGCA GTATTATGGG TTGGCCGGAT
CCGGTTACGA GGAAAAGCAG CGAAATCTGG GCGCGTGGAA ACGGCTGGAT CGGTATGGCG
CTTTCAGATG CCCTGAATAC CATCTCTAAA AAATCAAAGT ACCGCAAACA ATTGGAAAAG
GCTTTTTTAC AGTATGTAGC AGCCATTGCC CCATTGCAAA ACCGTGAATC AGGCCATTGG
TATCAGTTGC CGACTTTAGT GAATGAACCT AAAAACTTTC TGGAAAGTTC TGCTACCGCC
ATGTTTGCCT ATACCATTAC CATGGGCTTA AAAATGCACA TGCTGGACCA GAAAAAATAC
GGGCCGATGG CAGATCGGTC TTACAATGGC ATCATCAAAA ATAGCCTAAG GGATGCCGGT
AACGGATATA AGGTGCCTGC AAGAGTTTCA GGTGGTACCT GTATTGGTGA TGAGAATTAT
TACCTGGGCC GAAAAATAAC AGAAGGTACA GGGTTTGGCT ATGGCGCATT CATCATGTTT
GGGCTTGCCT ATGAACAATA TAAAGGATTA CGTAAATGA
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| Protein sequence | MKHLNYFSMK HAVCLWVVSI FGIASTPVFS QSWVDAVDRH GREMYMPAAQ YKWDWGQATF
LNALVQLYKA SGEVQKKTYL NYIKQAMDAS FNVANGKHPN AVASAHGMAF LARITGEKKY
LDKCNEIYAD YLKIPRAPNG GVSHRAETVE LWDDTVYMLN MFLLEMYRLT GDEKYIADFV
EQFKAHQEKL IDAKSGLWVH GWDADQADYN DGCSIMGWPD PVTRKSSEIW ARGNGWIGMA
LSDALNTISK KSKYRKQLEK AFLQYVAAIA PLQNRESGHW YQLPTLVNEP KNFLESSATA
MFAYTITMGL KMHMLDQKKY GPMADRSYNG IIKNSLRDAG NGYKVPARVS GGTCIGDENY
YLGRKITEGT GFGYGAFIMF GLAYEQYKGL RK
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