Gene Phep_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2877 
Symbol 
ID8253985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3424894 
End bp3425355 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content39% 
IMG OID644936522 
ProductMaoC domain protein dehydratase 
Protein accessionYP_003093137 
Protein GI255532765 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.589476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATCA TCAATAATTT CGAAGAGTAT AAATCCCATT TAGGTAAAGA ACTAGGTGTC 
TCCAAATGGC ATCGAATAAA TCAGGAACAG ATTAACCAAT TTGCCGATGC CACCTTAGAT
CACCAATGGA TACACGTTGA CAGGGAAAAA GCCGAAACCG AAGGCCCATT TAAGGCAACC
ATAGCACATG GATATTTAAC GATATCGTTA ATTCCATATT TATGGAAGCA AATTGCAGAG
GTCCGCAACA TTAAAATGGA AATCAACTAC GGCATAGAGC GCTTTAAATT CGGACAGCCT
GTCCTTGTCG ACAGTGAAGT GCAGTTAAAA GCGAAACTCG TTTCTATTGT GAATCTGAGA
GGCGTTACGA AAGTGGTTAT TGAAGCAACT CTTGTCATTA AGGATCATCC AAAGCCAGCT
TATAACGGAG ATGTTGTATT CTTGTATCAT TTTATAGCCT GA
 
Protein sequence
MLIINNFEEY KSHLGKELGV SKWHRINQEQ INQFADATLD HQWIHVDREK AETEGPFKAT 
IAHGYLTISL IPYLWKQIAE VRNIKMEINY GIERFKFGQP VLVDSEVQLK AKLVSIVNLR
GVTKVVIEAT LVIKDHPKPA YNGDVVFLYH FIA