| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2869 |
|---|
| Symbol | |
|---|
| ID | 8253977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 3417120 |
|---|
| End bp | 3417761 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644936514 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003093129 |
|---|
| Protein GI | 255532757 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.113209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.67039 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTTT TATCAGGTGG TCCTTATTAC GATATGATCG GAAGGACCGG AAACAACGTT
GGACGCCGCG TAAAGGGAAA AAATGTATTC TCTATGCGGC CATCCAAATC AAACAAAGCA
CCTACGGTGG CACAGGTAAA CCAGCGGCTA AGGTTTGAGC TGGTAGCCTC ATGGCTGAGG
CGCCTTGGCA GTGTGATTGA CATCGGCTTT AAAGAGTATG ATGCGCAAAT GTCTGCACGT
AATGCGGCCT TTTCCTATAA TGTATTGCAT GCGATTACAG GGGTAACACC CAATTACACC
ATTGATTATG CTAAGGTAAT GTTTAGCAAG GGCCCGCTGG ATTTACCAAA CGACCCGCAA
ATCAATGTAG CTACGGCTGC TAAACTGGAT TACAGTTGGG CTGCCACTAC TGGTGACAGC
AATGGATTGG CTACGGACAA GTTCAGTTTT GTGGTGTTTA ACCCATCAAA AAACAAATTT
GTAACGCTGA AAGGTGGAGC CGTACGCTCG GCTTTGGCTT ACAGCCTGCA GCTGCCCGGC
GATTTTTCGG GAGATACTGT AGAGGCCTAT TTTTCTATAG TATCAGCTGA TGGGAAAATG
GTAAGTGACT CGGTTTATAT AGGGCCGTTT ATTGTACTTT AA
|
|---|
| Protein sequence | MGFLSGGPYY DMIGRTGNNV GRRVKGKNVF SMRPSKSNKA PTVAQVNQRL RFELVASWLR
RLGSVIDIGF KEYDAQMSAR NAAFSYNVLH AITGVTPNYT IDYAKVMFSK GPLDLPNDPQ
INVATAAKLD YSWAATTGDS NGLATDKFSF VVFNPSKNKF VTLKGGAVRS ALAYSLQLPG
DFSGDTVEAY FSIVSADGKM VSDSVYIGPF IVL
|
|---|
| |