| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2855 |
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| Symbol | |
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| ID | 8253963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 3405840 |
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| End bp | 3407279 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644936501 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003093116 |
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| Protein GI | 255532744 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.142091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAC AAAGATATAC GCAAACAACA AAAGGTTTTC TTTTGATTTG TAGCTTGATA
TTTTTAATCT CATGCAAAAA AATGGTTGAG ATTGAATTGC CAAATGACCG TTTAAATACT
ATTACAGTTT TTGCAGATAG TGCTAATGCT ACACAAGCGA TTTTAGGATT GTATATAAAG
ATGTTGCAAA ATGGCGGCGG TAATCCAGAT TTTTGGGGCG GCGGAATCAC ACTCAATGGT
GGTTTATCTG CTGACGAATT AGTGCCCACC GCTCTGAATT CGGAACTTGG TCAATTTTAT
GTTAACAGTA TATCTGTCAA CAATGGAACA AATGACAGTT TTTTGTGGAA ATCGGCTTAT
TATCTTCTTT ATCACGCAAA TGCTTGTATT GAAGGCGTAA CGAAAAGCAC TTCTCTAGAT
GAGAAACTAA AAAATAAGCT AGTTGCCGAG GCAAAATTTA TAAGGGCACT TGGTTATTTT
TATCTTCTTA ATATGTATGG CGACGTACCT TTAGTTATCA GTACGGATTT CAAAGGCAAT
GCTATATTGC CGCGCACACA GCATCAACAA ATATACACAC AAATTATTAG TGATTTGAAA
GATGCGCAAC GAGATTTGCC TGCGTCATAC ATGACCAATG GAAGATTTAG GCCGAACCGA
TATGCTGCTA CAGCTTTGAT GGCCCGTGTA TACTTGTTTC AAAAAGAATG GGCGAAGGCT
GAAGAAGCTG CATCAGAGCT AATTGACAAT TCAATCTATC AATTGGAGCC AGATTTGAAT
GCGGTATTTC TCATAGGAAG CAAGGAAGCT ATCTTGCAGG TGATGTCGAA TACAACTTCA
ATAATAGAAA TACCTGAAGC ATATGTATTT ATTCCTGGTG GTGGATCTGG ATCTCCGGAA
GGTTTACTTC CATCCTATGT GATAAGCTCT GATTTGCTAA ATACTTTCGA AGCCGGCGAT
TCTCGTAAGA ACAATTGGCT TGCTAGCTCA ATAGTGAACA ACCAAACTTA CTATTATCCC
TATAAGTATA AAAGAGGGCT GATTAGTAGT AATTCTTCTC CAAAAGAAGG CTATATGGTA
CTACGTCTAG CGGAACAGTA TCTTATCCGT GCCGAGGCAA GAGCTCAATT AAATAATATT
TCGGGAGCAA TTTCAGATCT AAATGAGATA AGGAAAAGAG CTGGATTGAC GAATACAAGT
GCCAATGATC AGGAGAGCAT TTTAGCTGCT GTTTCAATAG AAAGAAGACT GGAATTTTTC
TGCGAATGGG GAGCTCGTTG GCTAGACTTG AAAAGAACCG AACAGATCGA TCCGGTAATG
AGGGTAGTAA CACCTCAAAA AGGAGGTGGT ATATGGAATG CAAGCCATCA GCTATTTCCA
ATTCCATTTT CTCAAATCCA GGTTAATCCT TATCTAATCC AAAATCCGGG TTATAATTAA
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| Protein sequence | MKRQRYTQTT KGFLLICSLI FLISCKKMVE IELPNDRLNT ITVFADSANA TQAILGLYIK
MLQNGGGNPD FWGGGITLNG GLSADELVPT ALNSELGQFY VNSISVNNGT NDSFLWKSAY
YLLYHANACI EGVTKSTSLD EKLKNKLVAE AKFIRALGYF YLLNMYGDVP LVISTDFKGN
AILPRTQHQQ IYTQIISDLK DAQRDLPASY MTNGRFRPNR YAATALMARV YLFQKEWAKA
EEAASELIDN SIYQLEPDLN AVFLIGSKEA ILQVMSNTTS IIEIPEAYVF IPGGGSGSPE
GLLPSYVISS DLLNTFEAGD SRKNNWLASS IVNNQTYYYP YKYKRGLISS NSSPKEGYMV
LRLAEQYLIR AEARAQLNNI SGAISDLNEI RKRAGLTNTS ANDQESILAA VSIERRLEFF
CEWGARWLDL KRTEQIDPVM RVVTPQKGGG IWNASHQLFP IPFSQIQVNP YLIQNPGYN
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