| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2844 |
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| Symbol | |
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| ID | 8253952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3390399 |
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| End bp | 3393548 |
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| Gene Length | 3150 bp |
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| Protein Length | 1049 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936490 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093105 |
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| Protein GI | 255532733 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0308966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA CATTACTTTT AATTCTGTTT CTGTTTATCT GCACATTTAC TTATGCGCAG
GAAACCATCA CCGTTACTGG TGTAGTAACA GATGGAACTA ATCAGCCGAT GCCCGGTGCG
ACGGTAATGG AGCGGACCAC CTCAAATGCT GTGATAACTG CTAATAACGG GAGTTATCAG
ATCAAGGTAA AATCGAATGC CATATTGGTA TTTAGTTATC TGGGCAGTAA AACGGTTGAA
GTTCAGGTAA AGGACAGGAA AACCATTAAT GTAAAGTTAC TTGACGATCA GAATAACCTG
AACGAAGTTG TAATTACTGG TTATGGACAG GCCGTTCAGC GGAAAGACCT TACCGGGGCA
GTATCATCAA TAAGTGGTAC TGAACTGGCA AAAGTGCCAG TGCAAAACGT AGCCCAGGCC
TTGCAGGGAC GTATCGCCGG TATGCAGGTA ACGATGGCAG ACGGAACTCC CGGTGCGGCT
CCTTCAATGA AAATACGCGG AGGAACCTCT ATCACGCAAA GCAATGAGCC ATTGTATGTG
GTAGATGGTG TGCCGCAAAC TGATGGGCTT GATTTTTTAG ACCCAATGGA CATTGAATCA
GTTGATGTAC TGAAGGATGC TTCATCAACG GCGATTTATG GTGCCAGAGG AGCTAACGGT
GTAGTTTTAA TAACTACCAA GCAGATCAAA GGAGGAGGGC TTAAAGTTAA CTATGATGGA
TATGTAGGGG CAAAAAAAAT CACGACCTAT TTACCGGTAT TAAATGCCTA CGATTATGCT
TTTTTACTTT ATGAAAGAGC AATTGGAAGG GGCGGCGACA GATTGCCGGC ATTTGAAGCA
AACTATGGCA CGTTTGCAGA CCTGGAAAAA AATTATGGCA ACAGGCCTGG TATAGATTGG
CAGAAAGAAG TTTTTGGGCA CACGGTGATG AACCAGTACC ATAAGTTTAG CATCAGTGGC
GGTGGAAACG ATACCAGGTT CAATATTTTT TACTCAAAAA ACATAGATGA GGGAATTATG
CTGGGCAGTG GTTCTGATAA AAACATTGCT AAACTAACTG TGAGCCATAA TTTAAGTAAA
AAGTTCAGTA TCAATGCCAT TGTGAACTAT TCCAATCAAA AGCTAACTGG CATTGGAACA
CAGGAAGGCG GAACTTCGAG GTTTAACTAC CTTCAAAACC TCTTTCAGTA TCGTCCCACA
AATGGTATTA AAGGTCTGGA TGATGAACTG ATAGATCTGG ACCTGGATCC TTTAGATCCA
AACCAAAGCT CCCCTTCTTT TCAAAGCCCG CTGGTAGCCA TTGAATCCAA TCCAAGAGAC
AGGAAGAAAA AGACATTAAA TGTAAATGCT TCCCTTCAGT ATAACATTAT TAAAAACCTG
ACCTATCGTG GTCTTGTCAG TTATACTGAT GGCAGCGATA AGGCCAAGAG TTTTACTACA
ACTGAGAATT TGGCTGCCCG GCGTACAGGA GGACCTTTTG GCTCTATTTC TGATGCACTT
GCCAACCGCT TTAATTATAA CAACACGCTT ACTTACAGCA ATACTTTTAA CAAGATACAT
AAGCTGGATG CAACCATAGG ACAGGAATAT ATTTATAACT ATACCGAGCG CTTTGGCGTA
AGTACCAGTG CTTTCCCGAA CGTAAATTTA GGCTGGGATA AACTGGAATT AGGTACACTT
CCGGGTATTC CGACTTCCTT TGCAGAAGAT GACAAATTAT TTTCTCTTTT TGGGAGGCTG
AATTACAGCT ATAAAGGAAA GTATCTTTTA ACTTCAAGTT TGAGGTATGA TGGCTCTTCC
AAATTCGGCG AAGAAAATAT CTGGGGAATA TTCCCTTCGG CGGCGGTAGC CTGGAGAATT
GTGGAAGAGG ATTTTATGAA AAAATTTAAA GCTATATCAG ATCTGAAATT GCGTTTAAGT
TATGGTTCAT CTGGAAATAA CCGCATTGGT AACTACCAGG CATTGGGCAT TTTTGGAACT
TCAAGTTACC CCTTAAACAA TCAGCTGGTA ACTTCTGCAG GCCAGCTTAA CTTACCTAAT
CCTTCACTGA AATGGGAAGC AAACCAATCC TTTAACCTTG GTCTGGATCT GGGCCTTTTT
AAGCAAAGAG TGTCTTTCAC AGCTGAGCTG TACGATAATC GTTCGAAAGA CCTGCTGTAT
CGTTCCCGTA TTCCGGCGAG TTCAGGTTTT ACGGAACAAT TTAGAAACAT CGGCACAACC
TCGAGCAGGG GTATTGAATT TACTTTAAAT ACCATCAATG TAAGAAACAA TAGTTTCAAC
TGGAGCAGTA ACTTTAATAT TGCTTTTAAC AAAACCAAGG TACTGGGTTT AAGTGAGGGG
GAAAATTCCA TGCTAACAAA TAGCTGGACC ACTACCAATG ATTATATACT GCAGGTTGGT
CAGCCGGTGG GTATCATGTA TGGCTACAAG CAAGCAGGCC TGTACCAGGT GGATGACTTT
GATTTTAACG CAGCAAACAA CACTTATACT TTAAAAAGCG GTGTAGTAAC GGATGTCGCA
GTAGTGCAGC CGGGTTATAT CAAATTTGCC GACTTAAATA ATGACGGCAA AATAGACGAC
AATGACAGAA CAGCAATAGG AAATGCCAAT GCCAAGTTTT CCGGAGGTTT AAATAATACC
TTCAGTTATA AAGGGTTTGA CCTCAGTGTT TTTGTTGACT TTACCTATGG GAATGACATC
TATAATGCGA ACAAGCTGAA CAATTCTGCA TTGTTTAACG ATTATGCAAG TACTTTTGCC
TATTTCAAAG ACAGGTGGAA GATCGTCAAT GCAGCTGGCC AGCGGATACT GGACCCTGTA
GAACTTGCCA ATGCCAATAG TGGGAAAACA ATTCCGGTTT TTGACGGTGC AACAGCCAAA
CGTTTACATG ATACTATGAT TGAGGACGGT TCCTTCTTGC GCATCAATAA CATCAGCCTC
GGTTATACCC TTCCTAAAAG CTGGTTAAGC AAGGTTAAAA TAGCCAATGC CCGTTTGTAT
GTAACTGCAT ATAACCTGCA TGTATTTACA AATTACAGTG GCTATGATCC GGAGGTAAGC
GTATTCAGCG ATCCGCTTAC GCCAGGAGTA GATTTTAGCG CTTACCCAAG GGCAAAATCA
TTTGTTGCAG GTCTTAACGT ATCCTTTTAA
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| Protein sequence | MKRTLLLILF LFICTFTYAQ ETITVTGVVT DGTNQPMPGA TVMERTTSNA VITANNGSYQ
IKVKSNAILV FSYLGSKTVE VQVKDRKTIN VKLLDDQNNL NEVVITGYGQ AVQRKDLTGA
VSSISGTELA KVPVQNVAQA LQGRIAGMQV TMADGTPGAA PSMKIRGGTS ITQSNEPLYV
VDGVPQTDGL DFLDPMDIES VDVLKDASST AIYGARGANG VVLITTKQIK GGGLKVNYDG
YVGAKKITTY LPVLNAYDYA FLLYERAIGR GGDRLPAFEA NYGTFADLEK NYGNRPGIDW
QKEVFGHTVM NQYHKFSISG GGNDTRFNIF YSKNIDEGIM LGSGSDKNIA KLTVSHNLSK
KFSINAIVNY SNQKLTGIGT QEGGTSRFNY LQNLFQYRPT NGIKGLDDEL IDLDLDPLDP
NQSSPSFQSP LVAIESNPRD RKKKTLNVNA SLQYNIIKNL TYRGLVSYTD GSDKAKSFTT
TENLAARRTG GPFGSISDAL ANRFNYNNTL TYSNTFNKIH KLDATIGQEY IYNYTERFGV
STSAFPNVNL GWDKLELGTL PGIPTSFAED DKLFSLFGRL NYSYKGKYLL TSSLRYDGSS
KFGEENIWGI FPSAAVAWRI VEEDFMKKFK AISDLKLRLS YGSSGNNRIG NYQALGIFGT
SSYPLNNQLV TSAGQLNLPN PSLKWEANQS FNLGLDLGLF KQRVSFTAEL YDNRSKDLLY
RSRIPASSGF TEQFRNIGTT SSRGIEFTLN TINVRNNSFN WSSNFNIAFN KTKVLGLSEG
ENSMLTNSWT TTNDYILQVG QPVGIMYGYK QAGLYQVDDF DFNAANNTYT LKSGVVTDVA
VVQPGYIKFA DLNNDGKIDD NDRTAIGNAN AKFSGGLNNT FSYKGFDLSV FVDFTYGNDI
YNANKLNNSA LFNDYASTFA YFKDRWKIVN AAGQRILDPV ELANANSGKT IPVFDGATAK
RLHDTMIEDG SFLRINNISL GYTLPKSWLS KVKIANARLY VTAYNLHVFT NYSGYDPEVS
VFSDPLTPGV DFSAYPRAKS FVAGLNVSF
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