| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2841 |
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| Symbol | |
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| ID | 8253949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3385601 |
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| End bp | 3387022 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644936487 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003093102 |
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| Protein GI | 255532730 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.252312 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00495105 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGAA TTGGCATTGT TTTTTTCTTA TTAGTGATGA TATCATGTTC ACTAAGTGCA
CAAGATAGTA AAATGGAGTG GTGGCGCGAA GCCCGTTTTG GAATGTTCGT TCATTTTGGT
GTGTACGCCC AGTTTGGGGG TGTTTACCGG GGTCATGAAC AAAAAGTTAA AAATGGAGAA
TGGTTGATGA ACCGGATGAA AGTCCCCGTT CAGGAATATA AAGATACAGC TGGACATTTT
AATCCCATAA ATTTCAATGC TGATGAATGG GCACGTATGG CCAAAGACGC AGGCATGAAA
TATTTGGTTA TTACGGCAAA GCACCATGAT GGATTTGCAT TGTTTGACAC CAAAGCCAGC
GATTGGAATA TTATGAAAGC ATCACCTTAT GGTAAAGATA TGATTAAACC TTTAGCTGAT
GCTTGCAGAA AGTATGGTTT AAAATTTGGT ATTTATTATT CACAATCACA AGATTGGGGA
AATCCTGGTG GTTTTACTGG TCGCAGGGTC ATGAAACAAG GATGGGATAA TCCGGATAGC
ACGCGTATCG ATGCCTATAC TTTAGCGCAC AATGGCAGTT GGGACCCCAT ACAGCAATCA
AAAACTTTCA ACGAGTATTT AAACGGTGTA GCTTTTCCAC AGGTAAAAGA GTTATTGTCT
AACTATGGCG ATGTTTCCGT ATTGTGGTGG GATACACCTG GAGGATTATC TGCTGAACAG
GCCAGACAAA TGATGACTAT GGTGAAGCAC TTGCAGCCTA ATATCATTAC CAATGACAGG
CTGGGAGGAA ATTTGCCAGG TGATTTTAAA ACTCCTGAAC AAAAAATACC CAATCTGGCA
GAGCTTGATG GTAAAGATTG GGAAACCTGT ATGACCATGA ACCGCACCTG GGGCTATCGC
ACAGCCGATC ATGAATGGAA GTCTTCTTCA GAACTGATCC AGAAATTGAT AGATATTGCT
GCTAAAGGGG GCAATTACCT CCTCAATATC GGTCCTAAAC CAGATGGTAC TTTCCCCGTT
GAAAGTGTTG AACGTTTAAA AGAAATAGGT AACTGGATGA GCAAATATGG TGAAGCTATT
TATGGCACCC ATGCTAACCC TGTTGAGCCT GTAGATTGGG GACGCATTAC TGCCAAAGAT
GAACAACATG GTACTGTACT TTATTTGTCC GTTTTCAATT GGCCCGGCAG TGGTCAGCTA
AACATTGATG GGCTGGGTAA TAAGGCAATT GGTGCCACAT TATTAAACAG CAATGCAAAG
CTGAAACTTA AACAGGATGA GCAGGGTATT TTAGAAATTA GTGGTCTGCC TGTCAGTGCA
CCTGATAAAA CAGCAAGTGT AATTGCTTTG AAGCTGAATG GTTTTGCAAA AAAGAAAGAT
TTTAATCCGG AAAAGAAAAT GAAATCGGGT TCAATAGATT AA
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| Protein sequence | MKRIGIVFFL LVMISCSLSA QDSKMEWWRE ARFGMFVHFG VYAQFGGVYR GHEQKVKNGE
WLMNRMKVPV QEYKDTAGHF NPINFNADEW ARMAKDAGMK YLVITAKHHD GFALFDTKAS
DWNIMKASPY GKDMIKPLAD ACRKYGLKFG IYYSQSQDWG NPGGFTGRRV MKQGWDNPDS
TRIDAYTLAH NGSWDPIQQS KTFNEYLNGV AFPQVKELLS NYGDVSVLWW DTPGGLSAEQ
ARQMMTMVKH LQPNIITNDR LGGNLPGDFK TPEQKIPNLA ELDGKDWETC MTMNRTWGYR
TADHEWKSSS ELIQKLIDIA AKGGNYLLNI GPKPDGTFPV ESVERLKEIG NWMSKYGEAI
YGTHANPVEP VDWGRITAKD EQHGTVLYLS VFNWPGSGQL NIDGLGNKAI GATLLNSNAK
LKLKQDEQGI LEISGLPVSA PDKTASVIAL KLNGFAKKKD FNPEKKMKSG SID
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