Gene Phep_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2837 
Symbol 
ID8253945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3377427 
End bp3378113 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content38% 
IMG OID644936483 
Producthypothetical protein 
Protein accessionYP_003093098 
Protein GI255532726 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.932789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00194741 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAACC TGTTGTTCCT TTTTTTAGTA TTTATTACAA CGATATCCTC CTATGCACAA 
ACGCCAGGAA AACTCATATA TAAATCAGAT TTTTCCAGGC CGCTGGATTG TAAAGACTGG
GTAGCAGAAA TAGATAACCT ACCCGGACAT ACTTCGACAG TTTATACTTA CAGCAATGCT
TTAGTATTGG ATACCTGGGG AGGGGTAACG GTTTGGTTAA ATAAAAAACT GACTGGCAAT
ATACAGATTG AATACGATAG GATAGTGCAA ATGGGTAAGG GCTGTAACGA CCGTATTGGC
GACCTTAATC AGTTCTGGAT GGCAACAGAT CCTAAAAATG CGAGTTTGTT TACCAGAAGT
GGAAAATTTC AGGAGTATGA TAATCTCAAT TTGTATTATG CAGGAGTGGG TGGGAATTTC
AATACCACTT CCCGTTTTAG AAAATACCTT ACGCCTACAT CAAAACCCGT GGTAAAGGAG
TATACAGACA AGGAACATTT ATTAGAAGCC AATAAAGTTT ATCGTATTAA GATAATTGTA
AAAAACGGCA CTTCAAGTTT TTGGCTGAAT GGGGAATGCT GGTTCAACTA TACTGATCCA
AGTCCGCTAA CATCAGGTTA TTTTGGTTTC AGGAGTTTAC AATCCAGACA GGAAATTAAA
AACCTGCGCA TATATGCATT GGATTAA
 
Protein sequence
MKNLLFLFLV FITTISSYAQ TPGKLIYKSD FSRPLDCKDW VAEIDNLPGH TSTVYTYSNA 
LVLDTWGGVT VWLNKKLTGN IQIEYDRIVQ MGKGCNDRIG DLNQFWMATD PKNASLFTRS
GKFQEYDNLN LYYAGVGGNF NTTSRFRKYL TPTSKPVVKE YTDKEHLLEA NKVYRIKIIV
KNGTSSFWLN GECWFNYTDP SPLTSGYFGF RSLQSRQEIK NLRIYALD