Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2837 |
Symbol | |
ID | 8253945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 3377427 |
End bp | 3378113 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644936483 |
Product | hypothetical protein |
Protein accession | YP_003093098 |
Protein GI | 255532726 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.932789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00194741 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAACC TGTTGTTCCT TTTTTTAGTA TTTATTACAA CGATATCCTC CTATGCACAA ACGCCAGGAA AACTCATATA TAAATCAGAT TTTTCCAGGC CGCTGGATTG TAAAGACTGG GTAGCAGAAA TAGATAACCT ACCCGGACAT ACTTCGACAG TTTATACTTA CAGCAATGCT TTAGTATTGG ATACCTGGGG AGGGGTAACG GTTTGGTTAA ATAAAAAACT GACTGGCAAT ATACAGATTG AATACGATAG GATAGTGCAA ATGGGTAAGG GCTGTAACGA CCGTATTGGC GACCTTAATC AGTTCTGGAT GGCAACAGAT CCTAAAAATG CGAGTTTGTT TACCAGAAGT GGAAAATTTC AGGAGTATGA TAATCTCAAT TTGTATTATG CAGGAGTGGG TGGGAATTTC AATACCACTT CCCGTTTTAG AAAATACCTT ACGCCTACAT CAAAACCCGT GGTAAAGGAG TATACAGACA AGGAACATTT ATTAGAAGCC AATAAAGTTT ATCGTATTAA GATAATTGTA AAAAACGGCA CTTCAAGTTT TTGGCTGAAT GGGGAATGCT GGTTCAACTA TACTGATCCA AGTCCGCTAA CATCAGGTTA TTTTGGTTTC AGGAGTTTAC AATCCAGACA GGAAATTAAA AACCTGCGCA TATATGCATT GGATTAA
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Protein sequence | MKNLLFLFLV FITTISSYAQ TPGKLIYKSD FSRPLDCKDW VAEIDNLPGH TSTVYTYSNA LVLDTWGGVT VWLNKKLTGN IQIEYDRIVQ MGKGCNDRIG DLNQFWMATD PKNASLFTRS GKFQEYDNLN LYYAGVGGNF NTTSRFRKYL TPTSKPVVKE YTDKEHLLEA NKVYRIKIIV KNGTSSFWLN GECWFNYTDP SPLTSGYFGF RSLQSRQEIK NLRIYALD
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