| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2829 |
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| Symbol | |
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| ID | 8253937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3361760 |
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| End bp | 3364921 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936475 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003093090 |
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| Protein GI | 255532718 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.16137 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0213731 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGAT TTTTACTGCT ATTAATTATT GTTGCGGGTA ACCTTACGCT CTATGCCCAA
AATACAACTA CAAAAGGAGT TGTGTCTGAT GCCGGAGGAG AACCGCTTAT GGGAGTAAGC
GTATCTATAA AGGGAATAGG TAAGGGAAGG TCAACCGGCG TGGATGGAAG TTATACCATA
AGTACAAGTA ATCCCGATGC GATATTGGTT TTCTCCTATA TAGGATATAA AACTACAGAA
GAACCTGTAA ATGGCAGGAC TACGATTAAC GTAAAACTGG CTACTGATAC TAAAACCATG
AACGAGGTGG TGGTAATTGG TTATGGAACA GTTAAACGTA AAGAGCTGAC TGGCGCAATA
TCGTCTGTAA AAGGTGAAGA GCTGAGCAAA GTTCCGGTAC AAAATGTAGC CAGTGCATTG
GCCGGACGCA TTGCAGGCGT ACAGGTTACA GCTGCTGATG GTACACCGGG GTCAAACCCA
TCTATCACCA TACGTGGCGG GGGCTCGATT ACTCAAAGCA ATGAGCCATT ATATGTCATA
GACGGGATTC CACAAACCAA CGGACTGGGC TTTCTTGACC CGATGGATGT GGAAAGTATG
GATGTGTTGA AAGACGCATC TGCTACTGCG ATATATGGTG CCAGAGGTGC GAACGGTGTA
ATTCTGGTAA CTACAAAACA ACCTAAAGCA GGTAAACTGG CCTTATCTTA TGATATGTAT
TTTGGTGCTA AAGACATTAC GAAAACACTG CCTGTATTAA ACCCATATCA GTATACCTTA
TTACAATATG AAAAAAGTTT GGGTAATGCT ACTGAAGAAG CCAAGTTTTT AAGTAATTAC
GGTGCTTTTG CAGATCTGCA AAGTTTATAT GGAGACAAAT CAGGGGTAAA CTGGCAAAAT
GAACTGTTTG GGGGTACATC CAATAGCCAG TACCATAAAT TTGGTGTAGG GGGTGGAAGC
AAAGAAACCA GGTTCAATTT CTTTTATTCT CATAACAATG ATGAAGGGAT TATGCTGAAC
AGCGGTTCCA AAAAGAATGT GGCCAAACTG AATGTAACCC ATAACGCCGG TAAAAAATTA
AGAGTAACAG GTATTGTAAA CTATTCCGAT CAGAATACCT TTGGGGTGGG TACGAGAAAA
GGCAATACCA GGTTTAACCA GTTGCAAAAC GTCTTCCAGT TCCGTCCAAC TTTTGGTTTA
AAAGGTACAG ATGCAGATCT GATTGGAATG GAAGAAGATC CATATTTACA GGATGATAGT
GGGAATACCT TACAAAACCC GATCATCAAT GCCCTCTCTC AGCAAAGGTC TTCGGCCAAT
AAGATCTTAA ATTTAAATGC TGCTGTTGAT TATGAACTGT TTAAAAACAT TACTTACCGG
GGTTTGGTAG GTTTAAGAAC ATCAGGTACA AAAACTAAAA TATTTAATGA TTCCCGTTCC
GTAAATGCGA AACGTTCTGG TGGCCCGAAT GGGTCCATTG CCCAGTCGGA CAGGAACGAC
TGGAATTACA GCAATACTTT AACCTATTCT AATGTGTTTA ACCAGGTGCA TAAACTGGAT
GTATTGGTGG GACAGGAACA GTTGTATTCC AAATCGGAAA ACTTCAGTGC CAGTTCAAAC
AGATTTCCGG ACCAGAGTTT AGGACTGGAC GATTTGTCGC AAGGTGTTTT ACCTGGAATC
CCAACTTCGT TTTCTGAAGA TGAGAAAATG TTTTCCCTGT TTTCAAGGGC TAATTATACC
TATAAGGGCA GGTATATCTT TTCTGCAAGC TTAAGGGCTG ATGGTTCCTC TAAATTCGGT
TCAGACAATA AATATGGCTA TTTTCCTTCT GGTGCATTTG CCTGGCGGGT AATTGAAGAA
GATTTTATGA AAAAGATCCC CGTGATATCT GATCTGAAAC TGCGTTTAAG TGTTGGGGTA
GCGGGAAATA ACCGGATTCC TAATTACCTT TCTCAGGCAC TTTTCCAATC CGGTTACTAT
CCTTTGAACA ACGAGAACGT AATTTCTGTA GGTTCGAGAA CATTGCCTAA CCCGGATTTG
AAATGGGAAA AAACACGTAC ACAGAACCTT GGTCTGGATA TCGGTTTCTT TAACCAGCGT
ATCCAGTTAA CGGTTGATGC CTACGATAAC CGCACAACAG ATTTATTGCT GAATGCCGAT
GTACCTAACC TTTCTGGTTA CAGTACCATG CTGATCAATG TGGGGGCCAC CAGTAACAGA
GGGATTGAGT TTACTTTAAA TACGGTAAAC CTTAAAGATG CCGGCGGATT TAGCTGGAAT
ACCACTTTTA ATATGGGCTT TAACTATAAT AAAGTGATTT CGCTTACCAG TGGAAATCAA
TTTATGTATG GTGCAGCAAG CTGGGGTGGT TTACAGGAAA AAGACTACAT TATACGTGTA
GGTGGTGCTG TAGGCAAAAT GTTTGGTTAT AAATCTAACG GTCTGTACCA GGTAAATGAA
TTTGATTATA ACCCTACAAC TAAAGTTTAT ACCTTAAAAG CAGGGATTCC TTTTGACGCC
AATAATGTAC CAAAACCTGG CTTTTTAAAA CTGGTTGATC AGACGGGTGA CGGAAAAATA
AATTCGGACG ACAGGGTAGT GATCGGAAAT GCAAATCCGA ACTTTATCGG CGGCATGAAC
AATACCTTTT CTTACAAAGG TATTGACCTG AGTGTTTTCT TAAACTGGTC GTATGGCAAC
GATGTGTACA ATGCCAATAA GCTGAACATG AGCCAGACCA ACCTGGATTA TAAAAATGCA
TTTGCTTATG TGGCCAACCG CTGGATGAGT ATTGATGCTG CCGGTCAGCG CGTAACAGAT
CCGGTTGCTT TGGCTGCATT GAACGAAGGC AAAACCATAC CGCTGTATAA TGGTGCGGGC
ACGGGCTTAA GGCTTTACGA CCAGATGATT GAAGATGGTT CCTTTCTGCG GATCAGTAAT
GTGAGCCTGG GTTATACCTT GCCAAAAGCT TGGTTGTCTA AAGTGAAAGT TTCGGGTGCA
AGGATATATG TAACAGGATA TAACCTGCAC ACCTTTACCA AATATTCAGG TTACGATCCG
GAAGTAAGTA CAGCGAACAG TACAGGACTT ACCCCGGGAG TTGATTTTGG GGCCTATCCA
AGAACCCGTT CTTTTGTTGC GGGTGTAAAT GTTTCTTTTT AA
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| Protein sequence | MNRFLLLLII VAGNLTLYAQ NTTTKGVVSD AGGEPLMGVS VSIKGIGKGR STGVDGSYTI
STSNPDAILV FSYIGYKTTE EPVNGRTTIN VKLATDTKTM NEVVVIGYGT VKRKELTGAI
SSVKGEELSK VPVQNVASAL AGRIAGVQVT AADGTPGSNP SITIRGGGSI TQSNEPLYVI
DGIPQTNGLG FLDPMDVESM DVLKDASATA IYGARGANGV ILVTTKQPKA GKLALSYDMY
FGAKDITKTL PVLNPYQYTL LQYEKSLGNA TEEAKFLSNY GAFADLQSLY GDKSGVNWQN
ELFGGTSNSQ YHKFGVGGGS KETRFNFFYS HNNDEGIMLN SGSKKNVAKL NVTHNAGKKL
RVTGIVNYSD QNTFGVGTRK GNTRFNQLQN VFQFRPTFGL KGTDADLIGM EEDPYLQDDS
GNTLQNPIIN ALSQQRSSAN KILNLNAAVD YELFKNITYR GLVGLRTSGT KTKIFNDSRS
VNAKRSGGPN GSIAQSDRND WNYSNTLTYS NVFNQVHKLD VLVGQEQLYS KSENFSASSN
RFPDQSLGLD DLSQGVLPGI PTSFSEDEKM FSLFSRANYT YKGRYIFSAS LRADGSSKFG
SDNKYGYFPS GAFAWRVIEE DFMKKIPVIS DLKLRLSVGV AGNNRIPNYL SQALFQSGYY
PLNNENVISV GSRTLPNPDL KWEKTRTQNL GLDIGFFNQR IQLTVDAYDN RTTDLLLNAD
VPNLSGYSTM LINVGATSNR GIEFTLNTVN LKDAGGFSWN TTFNMGFNYN KVISLTSGNQ
FMYGAASWGG LQEKDYIIRV GGAVGKMFGY KSNGLYQVNE FDYNPTTKVY TLKAGIPFDA
NNVPKPGFLK LVDQTGDGKI NSDDRVVIGN ANPNFIGGMN NTFSYKGIDL SVFLNWSYGN
DVYNANKLNM SQTNLDYKNA FAYVANRWMS IDAAGQRVTD PVALAALNEG KTIPLYNGAG
TGLRLYDQMI EDGSFLRISN VSLGYTLPKA WLSKVKVSGA RIYVTGYNLH TFTKYSGYDP
EVSTANSTGL TPGVDFGAYP RTRSFVAGVN VSF
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