Gene Phep_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2820 
Symbol 
ID8253928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3345354 
End bp3348101 
Gene Length2748 bp 
Protein Length915 aa 
Translation table11 
GC content43% 
IMG OID644936466 
Producthypothetical protein 
Protein accessionYP_003093081 
Protein GI255532709 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATT TCCACATTTT TATTTTTATA TGTCTTTCGC TTTTTAGCCA TGCTGAATCG 
CATGCTGCCA GAGTTGATAA AAAAAGCAAG CTCACCATTG TCATTCCCAT TCAAAACAGT
TCAAGGATTA AATTCGGTGC GGGTAAATTA GCAAGTGCTT TGAATTTAAT TGGTTATGAT
GTTAATATTG TACAAAGAGA CAAAGCTCCG GCCACAAAAA ATGTAATCGT TATCGGTACA
AAAAACGATA AGCTGTTAAA CAGTTTGGCT GCGGCTATGA ACGCTACTGG TACACAGGCC
GGAAAAGAGG GGTTCAGCAT CACTTATGCT AAAAACAGAA ACCTGGTTAT TGAGGGTACT
GATCCTTCCG GAGCTTTATA CGGTTGTATG GAGCTGGCTG ATGAAATAAA AAATACAGGT
AAACTACCTG AAAAGATTGC CCTTACAGAT CAGCCGGAAA TGGTATTGCG CGGAACCTGT
ATCGGACTCC AGAAACCCGA CTATCTGCCG GGCAGGGATG TTTACGAATA TCCTTATACC
CCGGAAACAT TCCCCTGGTT TTATGATAAA GCACTTTGGA TCCAGTATCT GGATATGATG
GTAGAGAACC GATACAATTC ACTTTACCTC TGGAACGGTC ACCCTTTTGC CTCATTGGTA
AGGTTAAAAG ATTATCCTTA TGCAGTGGAG GTAGACGATG TTACTTTTAA GAAAAATGAA
GAAATGTTCC GGTTTCTGAC TGAAGAAGCG GATAAACGTG GCATTTGGGT AATCCAGATG
TTTTACAATA TCATTATCCC TAAACCTTTT GCCGAAAAAC ACCACCTCAA AACGCAGGAC
CGTAACAGGC CGATTATTCC TCTTATAGCC GATTATACCC GCAAATCTAT TGCCGCCTTT
GTAGAGAAAT ATCCGAATGT GGGTTTACTG GTGGCCTTGG GCGAAGCTAT GGAAGGCGTA
GGGCAGGACG ATGTGGACTG GTTTACGAAA ACCATTATTC CGGGGGTAAA AGATGGCTTA
AAGGCTGCGG GTATTAAAAA TGAACCACCA ATTGTATTGA GGGCCCATGA TACCGATGCA
CCCAGGGTAA TGACCGCTTC CTTACCTCTG TATAAAAATT TATATACAGA AAATAAGTTT
AACGGAGAGG CGCTTACCAC TTATGAGCCC CGGGGAAGCT GGGCAGCGCT TCACAGAAAA
TTAAGTGCTG TTGCTCCGGT ACATATTGCA AATGTACATA TCCTGGCCAA TCTGGAACCT
TTCAGGTATG GGTCTGCCAA TTTTATCCAG AAATCTGTAC AGGCAATGGA TAAAATATAT
GGGGCAAAAG GACTGCACCT TTACCCGCAA TCGGGTTATT GGGACTGGCC ATACACAGCT
GATAAGATCA GCCCCAGGCA GTTGCAGGTT GACAGGGACT GGATCTGGTA CAAGGAATGG
GGCAGATATG CCTGGAATTC CAAAAGGGAC AGAAATGAGG AAATTGATTA CTGGGGAAAG
GAGCTTGCTG GTAAATATGG CACTGACCTG GCCAGTGGTA AAGCCATCCT GAACGCATAT
GAAGAATCAG GAGAAATTTC TCCTAAACTG TTGCGCCGCT ACGGGATTAC CGATGGCAAC
AGGCAGACTT TAACACTGGG GATGCTGATG ACCCAGCTGA TCAATCCTTA CCGTTATGGT
TTATTTACCT TAATGTATGA GTCTGAAGCC CCGGAAGGAG AGATGATCAT TGAGTACGCA
GAGAAAGAAT GGAAAAAACA AGGCCATATT GGAGAAACCC CTGTTCAGAT TGCCAAAGAA
GTGGTGGTAC ATGGACAGCA GGCCCTTGCA GCTATAAATG CAGCGGCAGC AACAGTTACC
CGTGATACCG CAGAATTTAG AAGGCTCAAA AATGATATGT ACTGCTACAA TGCCATGGCC
AATTTTTATG CAGAAAAGGT TAAATCGGCA CTATGGGTGT TACGCTATAA ATATTCAAAC
GATGTATCCG ACCTGGAAAA GGCCCTGCCC CTTTTAGAAA AGAGCGTAAG TTATTATGCT
GATTTGGTTA AACTAACAGA AAATGATTAC CTGTATGCCA ATAGTATGCA AACCAAACAG
CGTAAAATAC CTATGCGTGG CGTTGATAAA ACTTTTATCC ACTGGAAAGA GATGTTGCCG
GTTTTTACGA AAGAACTGGA CCATTTTAAA AAAAGCATAG ATTCTTTGAA ATCGGCAGGC
AAGGGGAAAG CGATTGTATT ACAGCCTTTT AAAAATGCAG CGGTTAAAAT ACTGTCGGAC
CAGGGAACTT ATGTTATTGG CAGGGATGCG GTGGTATTTA CAGATTCAGC AGCTAAAATA
AAGGATTTCA CGACACAGCT GAAGGGGCTT AAGGCTGTAA AAATGGCTAA AACAGAACAG
CTAAAAACGG GTACTACACT GAAGTTCAGT AATACCGTCC CGGTAAAGGT TTTGGTAGGT
TTTTTTAATA AAAAAGGCCC CTCATACCTT AAAGCTCCTG AACTCGAAAC CGATGCCAGT
GCAAACAATT ACGGGCAATC GGAGATAAAG ATTTCCAATG CCCTGGTTGT GGCGGGTTAC
CCGCCTGTCA ATGTACATGC TTATACTTTT GAAGCCGGAA CAAATACTTT AACTTTAGGA
AAGGGCGAAT GTCTGATCCT TGGCTTTATC ACTGAAAAGC AGGAAATGAG GATCTATAAT
GCGGGACTTG ACGGGCAAGG GAAAGACATT GACTGGTTAT TTGAATAA
 
Protein sequence
MRNFHIFIFI CLSLFSHAES HAARVDKKSK LTIVIPIQNS SRIKFGAGKL ASALNLIGYD 
VNIVQRDKAP ATKNVIVIGT KNDKLLNSLA AAMNATGTQA GKEGFSITYA KNRNLVIEGT
DPSGALYGCM ELADEIKNTG KLPEKIALTD QPEMVLRGTC IGLQKPDYLP GRDVYEYPYT
PETFPWFYDK ALWIQYLDMM VENRYNSLYL WNGHPFASLV RLKDYPYAVE VDDVTFKKNE
EMFRFLTEEA DKRGIWVIQM FYNIIIPKPF AEKHHLKTQD RNRPIIPLIA DYTRKSIAAF
VEKYPNVGLL VALGEAMEGV GQDDVDWFTK TIIPGVKDGL KAAGIKNEPP IVLRAHDTDA
PRVMTASLPL YKNLYTENKF NGEALTTYEP RGSWAALHRK LSAVAPVHIA NVHILANLEP
FRYGSANFIQ KSVQAMDKIY GAKGLHLYPQ SGYWDWPYTA DKISPRQLQV DRDWIWYKEW
GRYAWNSKRD RNEEIDYWGK ELAGKYGTDL ASGKAILNAY EESGEISPKL LRRYGITDGN
RQTLTLGMLM TQLINPYRYG LFTLMYESEA PEGEMIIEYA EKEWKKQGHI GETPVQIAKE
VVVHGQQALA AINAAAATVT RDTAEFRRLK NDMYCYNAMA NFYAEKVKSA LWVLRYKYSN
DVSDLEKALP LLEKSVSYYA DLVKLTENDY LYANSMQTKQ RKIPMRGVDK TFIHWKEMLP
VFTKELDHFK KSIDSLKSAG KGKAIVLQPF KNAAVKILSD QGTYVIGRDA VVFTDSAAKI
KDFTTQLKGL KAVKMAKTEQ LKTGTTLKFS NTVPVKVLVG FFNKKGPSYL KAPELETDAS
ANNYGQSEIK ISNALVVAGY PPVNVHAYTF EAGTNTLTLG KGECLILGFI TEKQEMRIYN
AGLDGQGKDI DWLFE