| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2815 |
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| Symbol | |
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| ID | 8253923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 3334114 |
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| End bp | 3335697 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936461 |
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| Product | SSS sodium solute transporter superfamily |
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| Protein accession | YP_003093076 |
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| Protein GI | 255532704 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGTC TCCCTATTTT CGATCTTGTT ATAATTGTCA TTTACCTTAT CGGAATGATA
TTGGTAGGGA TTTATTTTTC CCGCAACAAC AAAAACTCTG ACCAGTTTAC CAAGGCCTCG
GGCCTGATAC CTGGATGGGC CATCGGCTTG TCCATTTATG CTACCTTTTT GAGCAGCAAT
ACTTTTTTAG GCGTGCCGGG CAAAGCTTTT GGCAGCAACT GGAATGCCTT TGTCTTTAGC
CTTTCCATGC CGCTGGCCGC CTGGGTGGCT TCAAAATACT TTGTACCTTT TTACCGAAGT
ACAGGCGAAA TCTCTGCTTA CACACATTTG GAACATCGTT TTGGCGCATG GGCACGCACT
TATGCCGTAG TTTGCTTTTT ACTTACCCAG CTGGCCCGTA TGGGTTCTAT CTTTTTTGGG
ATTGCCTTAA GCTTACAGGC ACTTACCGGA TATTCCATGC AAATGATCAT GGTGGTAATG
GGGGTTTGTA TTATTATTTA TACGGTGCTT GGTGGTATTG AAGCTGTGAT CTGGACAGAA
GTGGTTCAGG CTGTAGTCAA AACTTTTGGA GCCTTGCTTA TCTTATATCT CATCATTACC
AATATGCCTG GCGGGGTGTC TAAAGTAATT GAGATAGGTA AATCAGCCGA TAAGTTTAGT
CTGGGTAGTT TTTCTCCCGA TTTTATCAGT TCCTCTTTCT GGGTGGTTTT ATTGTATGGT
TTCTTTATCA ACCTGAACAA CTTTGGTATG GACCAAAATT ATGTGCAGCG TTATCATACA
GCTTCTTCTT CAAAAGCAGC TTCCAGATCT ATCTGGTTAT GTGTATGGTT ATATGTACCT
GCCTCCCTGA TGTTCTTTGT TATAGGCTCT GCTTTGTATG CGTATTATGA AGTAAATCCT
GATCTGATTG CAAGCATAAA ACACCAGGTA GCAGTAGAGC GTTTGCCTTT AAATGCTTCT
GTTACAGAAA TAACAGATCT GGAAAAAACT TTACAGCCTG CCGATTATGG TGATAAGATC
ATGCCTCATT TTATGGTCAC AAAAATACCC GCAGGATTGG TTGGTCTTAT CGTTTCAGCC
ATTCTTTCTG CTGCCATGAG CACCATAAGC TCGGGGATGA ACTCATCAGC TACAGTGTTT
ACCGTCGATA TTTATAAAAG ATATTTTAAA CCCGATATCA CTGAAAAACA AAACCTGTCG
CTCCTGCATA TCGCTACCGT TGGATTTGGG CTTTTAGGGA TGGGCGCAGG TATTGCTATG
ATTGGTGTAA AGAGCATCCT TGATGTGTGG TGGGAGCTGT CGGGTATTTT CGCTGCGGGT
ATGCTCGGCT TGTTTTTACT GGGCATAGCC AGCAGGCAAA CCAAAAACCA TGAAGCATTT
ATTGCTACCA TGATTGGCAT TGTGGTCATC ATCTGGATGA CATTCTCTGC ACATTTGCCA
GCCCAATATG AGTTTTTGCG CAACCCGCTC CATAAAAATA TGATCATTGT AATTGGTACC
CTCAGTATTT TCCTGGTAGG CGTACTGTTA ACAAAACTGA AAAATAGAAA TTTAAAATCT
GCTGATGGAA ACATGCCGGT TTAG
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| Protein sequence | MKGLPIFDLV IIVIYLIGMI LVGIYFSRNN KNSDQFTKAS GLIPGWAIGL SIYATFLSSN
TFLGVPGKAF GSNWNAFVFS LSMPLAAWVA SKYFVPFYRS TGEISAYTHL EHRFGAWART
YAVVCFLLTQ LARMGSIFFG IALSLQALTG YSMQMIMVVM GVCIIIYTVL GGIEAVIWTE
VVQAVVKTFG ALLILYLIIT NMPGGVSKVI EIGKSADKFS LGSFSPDFIS SSFWVVLLYG
FFINLNNFGM DQNYVQRYHT ASSSKAASRS IWLCVWLYVP ASLMFFVIGS ALYAYYEVNP
DLIASIKHQV AVERLPLNAS VTEITDLEKT LQPADYGDKI MPHFMVTKIP AGLVGLIVSA
ILSAAMSTIS SGMNSSATVF TVDIYKRYFK PDITEKQNLS LLHIATVGFG LLGMGAGIAM
IGVKSILDVW WELSGIFAAG MLGLFLLGIA SRQTKNHEAF IATMIGIVVI IWMTFSAHLP
AQYEFLRNPL HKNMIIVIGT LSIFLVGVLL TKLKNRNLKS ADGNMPV
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