Gene Phep_2803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2803 
Symbol 
ID8253911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3317518 
End bp3319023 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content44% 
IMG OID644936449 
ProductABC transporter related 
Protein accessionYP_003093064 
Protein GI255532692 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.508475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGTTG TAGAAAACAT AAGTAAAAAT TTCTCGGGGG TAAAAGCACT GGATCAGATC 
AGCCTTGAAG TGCATGCCGC TCAGGTTACC GCTATCATTG GCGAAAACGG GGCCGGAAAA
TCCACTTTAA TGAAAATCCT TTCGGGCGTA TATCCCGATT ATGAAGGCAA AATCATTTTC
AAAGGCAAAA CCGTTAGCTT TTCCAGCCCT AAACAGGCAC AGGAATGTGG CATCTCCATT
ATTCACCAGG AACTGAACCT TATCCCCTAT CTGAGCATTA CAGAGAATAT ATTTTTAGGC
AGGGAACTCT GCACAGCATG GGGCGATCTG GATAAAAAGA GGATGCGCCT GAAAACGCAG
AAACTCTTGA GCCGTTTAAA GCTCAACATT GATCCTGATA CACGGATCAT TGATATCAAA
GTTGGGCAGC AGCAGGTAGT AGAAATTGCA AAGGCCCTGC TTACTGAATC TGAAGTGATT
ATTATGGACG AGCCCACTTC AGCCATCAGT GATACGGAAG TAAAAATCCT GTTTGACATC
ATCAACGACC TCCGTAAAGC GAATAAAGCC ATTGTTTACA TTTCCCATAA ACTCGATGAA
CTGTTTAAGA TTGCAGACAG GTATGTGATC ATGAGGGATG GCAGGGTGAT TGAATGTGGC
GAGATCGGTG AAATAAAGGC CGATGACATT ATCCATAAAA TGGTGGGCAG AGAAATTAAC
CTCATTAAAA AAGAAGGTTC GGGAGCCGGC CCGGAAGAAT TGTTCAGTGT AAAAGACCTT
TGTCTTAAAC ATCCGGACCA AAAGCATACC TATCTGCTTA AAAATATATC CTTCAGCCTC
AATAAAGGCG AGATTTTAGG CGTATTTGGT TTGATGGGCG CAGGAAGGAC TGAACTGCTG
GAAAGCCTGT TTGGCCTTCA TCCCAAACTA ATGCGCGCCG AGCTTAAAAT TGAGGGCAAG
GTCCTTAGCA TTGCCACTGC CGGAGATGCC ATAAAGGCCG GACTGGCCCT GGTTCCGGAA
GACCGGAAAA GAGACGGCCT TTTACTTGGC CTGGATGTTC AGAAAAACAT AAGTATCACT
ACTTTAAAAG AAATGGAAAA CCTGGGTATC CTGGAAATTG GCAAGGAAGC AAGGTTAAGT
GATAAATATA CCGCAGAACT GAAAATTAAG ACAGATTCCG GAAAGCAGGT TGCAGGTAAC
CTGAGTGGCG GCAATCAGCA AAAAATTGTC ATTGCAAAAT GGCTGGCCAC CCATCCCAGG
ATCTTCCTGC TGGATGAACC TACACGTGGC ATAGATGTAA ACGCAAAGAA CGAGATCTAT
AAACTTATCC TGGGCCTTGC AGCCCAGGGA ATGGGCATCA TCATGGTCTC TTCAGAATTA
CCGGAAATAT TAGCGGTATC AGACCGGGTA ATGGTCCTGT CGGAAGGTAC CATTACCGCA
CAGATCCCCA TCAGCGAAGC CAATGAAGCA TGTATTTTAA AAGCAGCAAT TCCAAAATCA
ATTTAA
 
Protein sequence
MLVVENISKN FSGVKALDQI SLEVHAAQVT AIIGENGAGK STLMKILSGV YPDYEGKIIF 
KGKTVSFSSP KQAQECGISI IHQELNLIPY LSITENIFLG RELCTAWGDL DKKRMRLKTQ
KLLSRLKLNI DPDTRIIDIK VGQQQVVEIA KALLTESEVI IMDEPTSAIS DTEVKILFDI
INDLRKANKA IVYISHKLDE LFKIADRYVI MRDGRVIECG EIGEIKADDI IHKMVGREIN
LIKKEGSGAG PEELFSVKDL CLKHPDQKHT YLLKNISFSL NKGEILGVFG LMGAGRTELL
ESLFGLHPKL MRAELKIEGK VLSIATAGDA IKAGLALVPE DRKRDGLLLG LDVQKNISIT
TLKEMENLGI LEIGKEARLS DKYTAELKIK TDSGKQVAGN LSGGNQQKIV IAKWLATHPR
IFLLDEPTRG IDVNAKNEIY KLILGLAAQG MGIIMVSSEL PEILAVSDRV MVLSEGTITA
QIPISEANEA CILKAAIPKS I