Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2803 |
Symbol | |
ID | 8253911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3317518 |
End bp | 3319023 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936449 |
Product | ABC transporter related |
Protein accession | YP_003093064 |
Protein GI | 255532692 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.508475 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTG TAGAAAACAT AAGTAAAAAT TTCTCGGGGG TAAAAGCACT GGATCAGATC AGCCTTGAAG TGCATGCCGC TCAGGTTACC GCTATCATTG GCGAAAACGG GGCCGGAAAA TCCACTTTAA TGAAAATCCT TTCGGGCGTA TATCCCGATT ATGAAGGCAA AATCATTTTC AAAGGCAAAA CCGTTAGCTT TTCCAGCCCT AAACAGGCAC AGGAATGTGG CATCTCCATT ATTCACCAGG AACTGAACCT TATCCCCTAT CTGAGCATTA CAGAGAATAT ATTTTTAGGC AGGGAACTCT GCACAGCATG GGGCGATCTG GATAAAAAGA GGATGCGCCT GAAAACGCAG AAACTCTTGA GCCGTTTAAA GCTCAACATT GATCCTGATA CACGGATCAT TGATATCAAA GTTGGGCAGC AGCAGGTAGT AGAAATTGCA AAGGCCCTGC TTACTGAATC TGAAGTGATT ATTATGGACG AGCCCACTTC AGCCATCAGT GATACGGAAG TAAAAATCCT GTTTGACATC ATCAACGACC TCCGTAAAGC GAATAAAGCC ATTGTTTACA TTTCCCATAA ACTCGATGAA CTGTTTAAGA TTGCAGACAG GTATGTGATC ATGAGGGATG GCAGGGTGAT TGAATGTGGC GAGATCGGTG AAATAAAGGC CGATGACATT ATCCATAAAA TGGTGGGCAG AGAAATTAAC CTCATTAAAA AAGAAGGTTC GGGAGCCGGC CCGGAAGAAT TGTTCAGTGT AAAAGACCTT TGTCTTAAAC ATCCGGACCA AAAGCATACC TATCTGCTTA AAAATATATC CTTCAGCCTC AATAAAGGCG AGATTTTAGG CGTATTTGGT TTGATGGGCG CAGGAAGGAC TGAACTGCTG GAAAGCCTGT TTGGCCTTCA TCCCAAACTA ATGCGCGCCG AGCTTAAAAT TGAGGGCAAG GTCCTTAGCA TTGCCACTGC CGGAGATGCC ATAAAGGCCG GACTGGCCCT GGTTCCGGAA GACCGGAAAA GAGACGGCCT TTTACTTGGC CTGGATGTTC AGAAAAACAT AAGTATCACT ACTTTAAAAG AAATGGAAAA CCTGGGTATC CTGGAAATTG GCAAGGAAGC AAGGTTAAGT GATAAATATA CCGCAGAACT GAAAATTAAG ACAGATTCCG GAAAGCAGGT TGCAGGTAAC CTGAGTGGCG GCAATCAGCA AAAAATTGTC ATTGCAAAAT GGCTGGCCAC CCATCCCAGG ATCTTCCTGC TGGATGAACC TACACGTGGC ATAGATGTAA ACGCAAAGAA CGAGATCTAT AAACTTATCC TGGGCCTTGC AGCCCAGGGA ATGGGCATCA TCATGGTCTC TTCAGAATTA CCGGAAATAT TAGCGGTATC AGACCGGGTA ATGGTCCTGT CGGAAGGTAC CATTACCGCA CAGATCCCCA TCAGCGAAGC CAATGAAGCA TGTATTTTAA AAGCAGCAAT TCCAAAATCA ATTTAA
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Protein sequence | MLVVENISKN FSGVKALDQI SLEVHAAQVT AIIGENGAGK STLMKILSGV YPDYEGKIIF KGKTVSFSSP KQAQECGISI IHQELNLIPY LSITENIFLG RELCTAWGDL DKKRMRLKTQ KLLSRLKLNI DPDTRIIDIK VGQQQVVEIA KALLTESEVI IMDEPTSAIS DTEVKILFDI INDLRKANKA IVYISHKLDE LFKIADRYVI MRDGRVIECG EIGEIKADDI IHKMVGREIN LIKKEGSGAG PEELFSVKDL CLKHPDQKHT YLLKNISFSL NKGEILGVFG LMGAGRTELL ESLFGLHPKL MRAELKIEGK VLSIATAGDA IKAGLALVPE DRKRDGLLLG LDVQKNISIT TLKEMENLGI LEIGKEARLS DKYTAELKIK TDSGKQVAGN LSGGNQQKIV IAKWLATHPR IFLLDEPTRG IDVNAKNEIY KLILGLAAQG MGIIMVSSEL PEILAVSDRV MVLSEGTITA QIPISEANEA CILKAAIPKS I
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