Gene Phep_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2798 
Symbol 
ID8253906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3312724 
End bp3314130 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content45% 
IMG OID644936444 
ProductL-fucose isomerase-like protein 
Protein accessionYP_003093059 
Protein GI255532687 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2407] L-fucose isomerase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGC AAACTACAAT AGGCGTAATT ATAGGCAACC GGGACTTTTT CCCCGACAGA 
CTTGTGGCTG ACGCCAGAAC GGAAATTTTA AAGGAACTGG ATAAACTGAA CATCAAAGCT
ATAGTTTTAG CAGAGTCCCA ATCGAAACTT GGGGGTGTGG AAACTTTTCA GGATGCACAA
AAATGTGCTG AACTGTTCAA ACAACACCGT GAGGAAATTA CTGGGGTTCT AGTGGTATTA
CCCAATTTTG GTGATGAAAG AGGCGTTGCT GAAACACTGA AACTCTCACA ATTAAATGTT
CCTGTACTCA TTCAGGCCTA TCCTGACGAC CTGGATAAAC TGGATGTGGC ACGGAGAAGG
GATTCCTGGT GCGGTAAAAT CTCTGTTTGT AATAACCTGT ATCAATTTGG CATCAAGTAT
ACCCTGACCA CCAAACATGT GGTCCATCCG TCAGACCCTT CTTTTATAGC AGACCTGAAA
GATTTTATTG CCGTATGCAG GGTGGTAAAA GGTTTAAGGA ATGTACGTAT TGGTGCAATA
GGTGCCAGAC CAGGCGGATT TAACACCGTA CGTTACAGCG AAAAAATATT ACAGCGACAC
GGCATTTCTG TAGTTACAGC CGATCTTTCA GAAATTCTGG GCAGCGCCAA TAAACTCAGT
AAAGACGACC AGGTAGTAAA AGACCACCTC GAAAAGATCC ACAACTATGC ACCATCTGGC
ACTACCCCGT CCGAAGCATT GATCCAGATT GCAAAGCTTG ACGTGGTGCT GAACGACTTT
ATGAAAACAC ATGCACTGGA TGCAACTGCC ATTCAGTGCT GGACCTCGCT GCAGCAAAAC
TATGGATGTA ATGTATGCAC ATCGATGAGC ATAATGAGTG AAAACATGCT TCCAAGTGCC
TGTGAAGTTG ATGTTACAGG TACCCTAACC ATGTATGCCA TGCAGCTGGC ATCGGGTTCG
CCAAGTGCAT TGGTAGACTG GAACAACAAT TATGCTGCAG ACGACGAAAA ATGCGTATTG
TTCCATTGCG GAAACTGGGC AAAGTCGTTT TTACCAGATA TACAGATCAG CAATGCGCCC
ATTCTAGGAA CTACGGTGGG TGTCGAAAAT ACTTACGGTG CACTTGACGG CCGCACACCT
GCAATGCCCT TAACTTATGG GAGGATCAGC ACGGATGATA CCCGGGGGGT AATCAAGGCT
TATTTTGGTG AAGGAGAACT TACCGACGAT GCCCTCAATA CTTTTGGCAA CAGGGCCGTA
GCCAAAATCA ATAATCTGCA GGGATTGATG CAGTACGTTT GCAGAAATGG CTTTGAGCAC
CATGTAGTCA TGAACGCTTC CAAAACCGGG GCCGTACTGA AAGAAGCATT TGAAAATTAT
ATGGGATGGG AAATTTATCA GCACTAG
 
Protein sequence
MEKQTTIGVI IGNRDFFPDR LVADARTEIL KELDKLNIKA IVLAESQSKL GGVETFQDAQ 
KCAELFKQHR EEITGVLVVL PNFGDERGVA ETLKLSQLNV PVLIQAYPDD LDKLDVARRR
DSWCGKISVC NNLYQFGIKY TLTTKHVVHP SDPSFIADLK DFIAVCRVVK GLRNVRIGAI
GARPGGFNTV RYSEKILQRH GISVVTADLS EILGSANKLS KDDQVVKDHL EKIHNYAPSG
TTPSEALIQI AKLDVVLNDF MKTHALDATA IQCWTSLQQN YGCNVCTSMS IMSENMLPSA
CEVDVTGTLT MYAMQLASGS PSALVDWNNN YAADDEKCVL FHCGNWAKSF LPDIQISNAP
ILGTTVGVEN TYGALDGRTP AMPLTYGRIS TDDTRGVIKA YFGEGELTDD ALNTFGNRAV
AKINNLQGLM QYVCRNGFEH HVVMNASKTG AVLKEAFENY MGWEIYQH