| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2771 |
|---|
| Symbol | |
|---|
| ID | 8253879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 3270766 |
|---|
| End bp | 3271275 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644936417 |
|---|
| Product | DinB family protein |
|---|
| Protein accession | YP_003093032 |
|---|
| Protein GI | 255532660 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2318] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.101507 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAAA ATCATTTTTT GTCCCTGTAT CAGTATAATA CATGGGCCAA TAATACAATA
TTGAATCACC TCAAACAACT TCCTGAAGGA ATTATCCGTA GCCAAGTCAA AAGTGTTTTT
CCTTCTATAT TTGATACCCT GATGCATGTT TACATCATTG ATCAGGGATG GTATTCTGTT
TTAACCAAAG CATACCGTTC AGATGATTAT CAAACTATAA AGACTACAGT GGATCGTTTA
GTAAGCGAGG TCAAAGATCT GGAACTGGGA GATTTTACGA AAAAGCAGCA GAACCTGGCT
ATCAACCTGG AAACTTTTAT TGCCGGGAAC GACATGGGAT ATATGGATAC ATTTTCAGGT
GTTCAGATGA CTTACGGGGA TGTGGTTACG CATATGGTTA ACCATGGCAC TTACCATCGT
GGTAATGTGA CGGCGATGTT GCATCAATTG GGGGAAAAAG GGGTACCCAC TGACTATGGG
GTATACCTTT ATTATACCAG TCGGCAATAA
|
|---|
| Protein sequence | MTKNHFLSLY QYNTWANNTI LNHLKQLPEG IIRSQVKSVF PSIFDTLMHV YIIDQGWYSV
LTKAYRSDDY QTIKTTVDRL VSEVKDLELG DFTKKQQNLA INLETFIAGN DMGYMDTFSG
VQMTYGDVVT HMVNHGTYHR GNVTAMLHQL GEKGVPTDYG VYLYYTSRQ
|
|---|
| |