Gene Phep_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2760 
Symbol 
ID8253868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp3265446 
End bp3266225 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content42% 
IMG OID644936408 
Productregulatory protein IclR 
Protein accessionYP_003093023 
Protein GI255532651 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATA AAGAAATGAA ATACCAGGCC CCTGCATTGG ATAAAGGTCT GGATATACTG 
GAATATCTGT CTGCTCAGTC CATCCCGCTT TCCCAAACAG AAATTGCGGT AGGAATAGAC
AAAAGTCCGA ACGAGATTTA CAGGATGCTG ATGAGTTTAG AAAGCCGCGG GTATATATTA
AGGGACGAAG TTTCGGGAAA ATACAGACTA TCTTTAAAAC TATTTTATCT TTCACACCGG
CATTCCCCTG TTGATGAATT GCGAAAGGCG GCGCAACATC CTTTAGAAGA ACTGGCCAAT
ACCGTAAGAC AATCCTGTCA CCTCAGTATA TTATATATGA ACCAGGTGAT GGTCATTATC
CACGCCAAAA GCCCTGGTCC TATTGCACTT TCTATAGAAG AGGGTAACCT GTTTCCTTTG
CCTTTAACTG CTTCCGGAAA AGTGCTGCTG GCCTATATGC CCGAGGCTGA ACAGGAAATT
GCTTTGAGTG GTAACACGAT CTATACAGAA TACAGCGATA AGGAAAAGAA CAAGTTTTTA
AAATCTTTAA AAGAAATACA GGCAAAGGGT GCTTATGTTA AAACAAGCGA CCTGGCTGCA
GGTGTTGTAG ATGTATCGGT TCCAATTGGC CGCGGCAGTA CCGGCATCAT TGCCTGTTTA
ACCGTTTCCA GCTTAACAGC CTTAAACATG AATAATGAAA TTGACAATGA AGCAGTATTG
GTAGAAGCAG TTAAGTGTGC AAAGAAAATT GAAGAAAGGA TTGGCATTAT TGCATTGTAA
 
Protein sequence
MKDKEMKYQA PALDKGLDIL EYLSAQSIPL SQTEIAVGID KSPNEIYRML MSLESRGYIL 
RDEVSGKYRL SLKLFYLSHR HSPVDELRKA AQHPLEELAN TVRQSCHLSI LYMNQVMVII
HAKSPGPIAL SIEEGNLFPL PLTASGKVLL AYMPEAEQEI ALSGNTIYTE YSDKEKNKFL
KSLKEIQAKG AYVKTSDLAA GVVDVSVPIG RGSTGIIACL TVSSLTALNM NNEIDNEAVL
VEAVKCAKKI EERIGIIAL