Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2760 |
Symbol | |
ID | 8253868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 3265446 |
End bp | 3266225 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644936408 |
Product | regulatory protein IclR |
Protein accession | YP_003093023 |
Protein GI | 255532651 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGATA AAGAAATGAA ATACCAGGCC CCTGCATTGG ATAAAGGTCT GGATATACTG GAATATCTGT CTGCTCAGTC CATCCCGCTT TCCCAAACAG AAATTGCGGT AGGAATAGAC AAAAGTCCGA ACGAGATTTA CAGGATGCTG ATGAGTTTAG AAAGCCGCGG GTATATATTA AGGGACGAAG TTTCGGGAAA ATACAGACTA TCTTTAAAAC TATTTTATCT TTCACACCGG CATTCCCCTG TTGATGAATT GCGAAAGGCG GCGCAACATC CTTTAGAAGA ACTGGCCAAT ACCGTAAGAC AATCCTGTCA CCTCAGTATA TTATATATGA ACCAGGTGAT GGTCATTATC CACGCCAAAA GCCCTGGTCC TATTGCACTT TCTATAGAAG AGGGTAACCT GTTTCCTTTG CCTTTAACTG CTTCCGGAAA AGTGCTGCTG GCCTATATGC CCGAGGCTGA ACAGGAAATT GCTTTGAGTG GTAACACGAT CTATACAGAA TACAGCGATA AGGAAAAGAA CAAGTTTTTA AAATCTTTAA AAGAAATACA GGCAAAGGGT GCTTATGTTA AAACAAGCGA CCTGGCTGCA GGTGTTGTAG ATGTATCGGT TCCAATTGGC CGCGGCAGTA CCGGCATCAT TGCCTGTTTA ACCGTTTCCA GCTTAACAGC CTTAAACATG AATAATGAAA TTGACAATGA AGCAGTATTG GTAGAAGCAG TTAAGTGTGC AAAGAAAATT GAAGAAAGGA TTGGCATTAT TGCATTGTAA
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Protein sequence | MKDKEMKYQA PALDKGLDIL EYLSAQSIPL SQTEIAVGID KSPNEIYRML MSLESRGYIL RDEVSGKYRL SLKLFYLSHR HSPVDELRKA AQHPLEELAN TVRQSCHLSI LYMNQVMVII HAKSPGPIAL SIEEGNLFPL PLTASGKVLL AYMPEAEQEI ALSGNTIYTE YSDKEKNKFL KSLKEIQAKG AYVKTSDLAA GVVDVSVPIG RGSTGIIACL TVSSLTALNM NNEIDNEAVL VEAVKCAKKI EERIGIIAL
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